PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G090700.1.p
Common NamePRUPE_ppa021384mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 186aa    MW: 19626.9 Da    PI: 4.608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G090700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.2e-151059155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        ++y+G+r ++  g+Wv+eIr+p++   ++r++lg++ t+e+Aa a++ a+++l+g
  Prupe.5G090700.1.p 10 TRYHGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPTPEMAASAYDVAALALKG 59
                        589***9.55.7*********843...5***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.27E-261069No hitNo description
PfamPF008471.3E-91059IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-251168IPR001471AP2/ERF domain
PROSITE profilePS5103219.7831167IPR001471AP2/ERF domain
SMARTSM003801.8E-261175IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-181269IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MASSSCGNHT RYHGIRCRGG KWVSEIREPR KTRRIWLGTY PTPEMAASAY DVAALALKGG  60
DAVLNFPSSI ALYPVPASRS PEDIRSAAAA AAAAAAAVSA ALQSNEEANN SLELKESPKK  120
QEDNMTTMMN STSLASSVGM DEEELFGMPN LLAEMAEGML LSPPRPPDYP ESGNSDGGES  180
GLWSF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-129721277Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G090700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210653.11e-133ethylene-responsive transcription factor ERF027
SwissprotQ9FJ908e-41ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLM5WDL21e-132M5WDL2_PRUPE; Uncharacterized protein
STRINGEMJ118521e-132(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.17e-39ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]