PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.5G023700.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 217aa MW: 24481.2 Da PI: 7.7309 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 29.7 | 1.4e-09 | 1 | 20 | 36 | 55 |
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m++kgLtl+h+kSHLQkYRl Prupe.5G023700.3.p 1 MGLKGLTLYHLKSHLQKYRL 20 899****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.9E-8 | 1 | 20 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 1.5E-23 | 70 | 114 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MGLKGLTLYH LKSHLQKYRL GQHARKQNSG EEHNRENNRD SYVHFSNHHS TGSSAKSSRG 60 GNAEQGTLPF SEALKCQIEV QNRLQEQLEV QKKLQMRIEA QGKYLQAILE KAQKGLSLDM 120 KGPTTIEATR AQLTDFNLAL SNFMENINEE DRRGKSNGST FEIYEEGNTE EHKDAKLKVE 180 RGSINFDLNT KGSFDYVGSN AGDFEPRCFR LLDTTL* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00544 | DAP | Transfer from AT5G45580 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.5G023700.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020418963.1 | 1e-158 | myb family transcription factor PHL11 | ||||
TrEMBL | A0A251P2K5 | 1e-158 | A0A251P2K5_PRUPE; Uncharacterized protein | ||||
STRING | XP_008238120.1 | 1e-149 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 8e-42 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.5G023700.3.p |