PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G011200.7.p
Common NamePRUPE_ppa001086mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 913aa    MW: 101702 Da    PI: 6.3477
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G011200.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK924.5e-29592643152
              RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                         aek i+le+l+kyFs+++kdAA+++gvc T+LKriCRq+GIkRWP+Rkik++
  Prupe.5G011200.7.p 592 AEKAITLEVLRKYFSGSLKDAANSIGVCSTTLKRICRQHGIKRWPSRKIKKV 643
                         5899**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.632582663IPR003035RWP-RK domain
PfamPF020428.1E-25596643IPR003035RWP-RK domain
SuperFamilySSF542771.3E-24807901No hitNo description
PROSITE profilePS5174527.193815898IPR000270PB1 domain
SMARTSM006667.6E-25815898IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2403.5E-23817895No hitNo description
PfamPF005645.6E-19817896IPR000270PB1 domain
CDDcd064071.38E-42817896No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 913 aa     Download sequence    Send to blast
MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SSAHINPSVF  60
WHMLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI  120
KSYELNRRWW IGPLGNQGPA SSVMERLTRA LVCIREVMRD KNVLVQVWVP VNKGGRNVLT  180
TNDDLFSLDS SCPRLSKYRD ISVNYQFSTG EDSTELVKGL PGRVFSGQVP EWTPDVRFFR  240
SDEYPRVDYA QRYDVRGTLA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV  300
DLQSSRNWST QNVKGCVKPY QAALPEIQEV LRCACETHKL PLAQTWVSCI QQGKDGCRHS  360
DDNYVHCVST VDHAFHVTDP YIEGFYEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV  420
KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDFVLEFFLP VECRDPEEQK KMLNSLSLII  480
QQICRSLRVV TDKELEEESD FPVSEMIVSS DPRPSGIASF TEVHLSGNDV SIFPMENPRE  540
VLGVKSSKLR QHQPDSNLKV GVKCGRECSA LGEGSFSSVG VSKTREKRRT KAEKAITLEV  600
LRKYFSGSLK DAANSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA  660
SGAFQINSFY TNFPELTSPN LSGTSPFSTS KLSDQPMPTN LSPEGGVVSP QATTSKSPSS  720
SCSQSSSSSQ CCSSRTQQHR PTCNVTGGDD PIVGDNSGDG VLKRVRSEAE LHAFGQDRTQ  780
LLPRSQSHKI LNELQKLQPI PPSLKNNGVA QEGEVQRVKV AYGDEKTRFR MQSDWRYEDL  840
VQEIAKRFSV EDMSKFYIKY LDDDSEWVLL TCDADLEECI DVCRSSQSNT IKLSLHLSRH  900
HLERFIGTGG PS*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G011200.7.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210497.10.0protein NLP5 isoform X2
SwissprotQ9SFW80.0NLP5_ARATH; Protein NLP5
TrEMBLM5WEH00.0M5WEH0_PRUPE; Uncharacterized protein
STRINGEMJ116960.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.20.0Nin-like family protein