PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G011200.1.p
Common NamePRUPE_ppa001086mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 914aa    MW: 101830 Da    PI: 6.3477
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G011200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK924.5e-29593644152
              RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                         aek i+le+l+kyFs+++kdAA+++gvc T+LKriCRq+GIkRWP+Rkik++
  Prupe.5G011200.1.p 593 AEKAITLEVLRKYFSGSLKDAANSIGVCSTTLKRICRQHGIKRWPSRKIKKV 644
                         5899**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.632583664IPR003035RWP-RK domain
PfamPF020428.1E-25597644IPR003035RWP-RK domain
SuperFamilySSF542771.3E-24808902No hitNo description
PROSITE profilePS5174527.193816899IPR000270PB1 domain
SMARTSM006667.6E-25816899IPR000270PB1 domain
CDDcd064071.37E-42818897No hitNo description
Gene3DG3DSA:3.10.20.2403.5E-23818896No hitNo description
PfamPF005645.6E-19818897IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 914 aa     Download sequence    Send to blast
MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SSAHINPSVF  60
WHMLEANGNL TMNPSENSNQ EVIQTPFFKQ LHEGPVNPQF PSQNMIDVDG YSGHSADPTI  120
KSYELNRRWW IGPLGNQGPA SSVMERLTRA LVCIREVMRD KNVLVQVWVP VNKGGRNVLT  180
TNDDLFSLDS SCPRLSKYRD ISVNYQFSTG EDSTELVKGL PGRVFSGQVP EWTPDVRFFR  240
SDEYPRVDYA QRYDVRGTLA LPIFEQGSRT CLGVIEVVTT TQKIKYQLEL ESVCKALEAV  300
DLQSSRNWST QNVKQGCVKP YQAALPEIQE VLRCACETHK LPLAQTWVSC IQQGKDGCRH  360
SDDNYVHCVS TVDHAFHVTD PYIEGFYEAC SEHHLLKGQG IVGKAFMTNQ PCFSDDITSC  420
VKTEYPLSHH ARMFGLHAAV AIRLRSMKTG STDFVLEFFL PVECRDPEEQ KKMLNSLSLI  480
IQQICRSLRV VTDKELEEES DFPVSEMIVS SDPRPSGIAS FTEVHLSGND VSIFPMENPR  540
EVLGVKSSKL RQHQPDSNLK VGVKCGRECS ALGEGSFSSV GVSKTREKRR TKAEKAITLE  600
VLRKYFSGSL KDAANSIGVC STTLKRICRQ HGIKRWPSRK IKKVGHSLQK LQLVIDSVEG  660
ASGAFQINSF YTNFPELTSP NLSGTSPFST SKLSDQPMPT NLSPEGGVVS PQATTSKSPS  720
SSCSQSSSSS QCCSSRTQQH RPTCNVTGGD DPIVGDNSGD GVLKRVRSEA ELHAFGQDRT  780
QLLPRSQSHK ILNELQKLQP IPPSLKNNGV AQEGEVQRVK VAYGDEKTRF RMQSDWRYED  840
LVQEIAKRFS VEDMSKFYIK YLDDDSEWVL LTCDADLEEC IDVCRSSQSN TIKLSLHLSR  900
HHLERFIGTG GPS*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.5G011200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020419455.10.0protein NLP5 isoform X1
RefseqXP_020419456.10.0protein NLP5 isoform X1
RefseqXP_020419457.10.0protein NLP5 isoform X1
SwissprotQ9SFW80.0NLP5_ARATH; Protein NLP5
TrEMBLA0A251P1R70.0A0A251P1R7_PRUPE; Uncharacterized protein
STRINGEMJ116960.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12373399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20640.20.0Nin-like family protein