PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.5G003000.1.p | ||||||||
Common Name | PRUPE_ppa008311mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 338aa MW: 37269.1 Da PI: 4.4536 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.6 | 3.1e-09 | 153 | 194 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +k+ rr +N+ AA rsR+RKk ++ Le k+k Le+e ++L Prupe.5G003000.1.p 153 SKKRRRQLRNKDAAVRSRERKKIYVRDLEMKSKYLEGECRRL 194 6999**********************************9866 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-10 | 149 | 209 | No hit | No description |
SMART | SM00338 | 0.0033 | 149 | 214 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.37 | 152 | 194 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.8E-7 | 154 | 194 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.13E-10 | 154 | 209 | No hit | No description |
CDD | cd14704 | 5.86E-15 | 155 | 206 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 157 | 172 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0030968 | Biological Process | endoplasmic reticulum unfolded protein response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence Send to blast |
MELEGDVGFL DENDIIGEID WDFLFDGSNT LEDVLELENP VVTATGSSSP SPSSTVEDAP 60 SDSSPDWIGE IETILMKDDD VNGNQVVPDS VEPTNAEYYE KFLADVLVDS PSTDAGSNAS 120 ADSEKEKLDR SPLNDDDDDD DDAADADADD PISKKRRRQL RNKDAAVRSR ERKKIYVRDL 180 EMKSKYLEGE CRRLGRLLQC CYAENHALRL GLQMNNAYGH GHGVLATKQE SAVLLLELLL 240 LGSLLRCLDI MCLVALPLIL MAGLRNPLNN VAANKDLENV DLRPRGAASK MFQHSVLLCF 300 SKSRRCKASR TKMKHSRFPC LLGSYVSFAL PLLMLAT* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.4545 | 0.0 | fruit |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00019 | PBM | Transfer from AT1G42990 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.5G003000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT373972 | 1e-105 | KT373972.1 Pyrus pyrifolia cultivar mixueli putative bZIP transcription 60 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007209330.1 | 0.0 | bZIP transcription factor 60 | ||||
TrEMBL | M5W9Y4 | 0.0 | M5W9Y4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ10529 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12009 | 30 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 4e-15 | basic region/leucine zipper motif 60 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.5G003000.1.p |
Entrez Gene | 18776076 |