PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G207000.1.p | ||||||||
Common Name | PRUPE_ppa021660mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 167aa MW: 19132.6 Da PI: 5.3584 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.9 | 1.4e-16 | 15 | 103 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 ffkvl + ++ l+lp f+e+ +g++ + + l+ ++g+ W+v+l + + +++++ +GW++Fv+++ L+ g f+vF +dg+s+f Prupe.4G207000.1.p 15 FFKVL--LGDFYQH-LRLPPVFIEKLDGES-LP-KCDLRGPNGKLWTVEL-EEIRENGFFFHDGWQGFVRDHCLEIGNFLVFDYDGDSKF- 98 66666..6666666.9********997763.44.89**************.3555666****************************9999. PP .EEEEE CS B3 92 lvvkvf 97 v+++ Prupe.4G207000.1.p 99 -DVTIY 103 .66665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.4E-21 | 9 | 108 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 12.83 | 12 | 106 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 1.04E-21 | 13 | 112 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 4.05E-19 | 14 | 103 | No hit | No description |
Pfam | PF02362 | 4.1E-14 | 15 | 101 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.0E-15 | 15 | 106 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MATKLSKPSL QKQSFFKVLL GDFYQHLRLP PVFIEKLDGE SLPKCDLRGP NGKLWTVELE 60 EIRENGFFFH DGWQGFVRDH CLEIGNFLVF DYDGDSKFDV TIYEPTGCEK DVEAAKRRNG 120 NPVSSVKDEI VDIETENYNK ESKSKTINAE RTSRKFYSIL NLLLNS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G207000.1.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008226602.1 | 1e-106 | PREDICTED: putative B3 domain-containing protein At5g66980 | ||||
TrEMBL | M5WXK1 | 1e-119 | M5WXK1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ14078 | 1e-120 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7185 | 15 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 1e-22 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G207000.1.p |
Entrez Gene | 18781259 |