PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G206900.1.p | ||||||||
Common Name | PRUPE_ppa015369mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 126aa MW: 14137.5 Da PI: 10.2232 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.8 | 1.7e-17 | 34 | 112 | 11 | 91 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 k+ +++pk+ a + g++ ++kt++l+d+ grsW vkl++ k++ + +tkGW + ++an++ +gD++vF++++ ++e Prupe.4G206900.1.p 34 KKLYSVTIPKELAIAEGLV--RKKTVKLQDPAGRSWIVKLRVHKSPYLrFDMTKGWAKCCRANQISQGDTIVFEFVK-PSGE 112 4556689******999999..6779***************77555543699***********************987.5554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 2.3E-18 | 21 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 9.81E-18 | 23 | 110 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.758 | 24 | 121 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 6.53E-16 | 27 | 114 | No hit | No description |
SMART | SM01019 | 2.5E-11 | 28 | 121 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 7.4E-15 | 34 | 111 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MCGKRPANDC VEETSTRSIL FESENSCFVK TLTKKLYSVT IPKELAIAEG LVRKKTVKLQ 60 DPAGRSWIVK LRVHKSPYLR FDMTKGWAKC CRANQISQGD TIVFEFVKPS GEIKHRTLGM 120 TNVTN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G206900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008226602.1 | 1e-67 | PREDICTED: putative B3 domain-containing protein At5g66980 | ||||
TrEMBL | M5X2H0 | 2e-88 | M5X2H0_PRUPE; Uncharacterized protein (Fragment) | ||||
STRING | EMJ15728 | 3e-89 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7185 | 15 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 5e-15 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G206900.1.p |
Entrez Gene | 18779426 |