PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.4G171200.1.p

Common Name

PRUPE_ppa005691mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NZZ/SPL

Protein Properties

Length: 449aa MW: 48873.3 Da PI: 8.0608

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.4G171200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	22.6	1.8e-07	28	80	50	102
NOZZLE 50 ktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrl 102 + + kqkk rg+gva+le+ ++e+++kk ++a + t s +++ ++t Prupe.4G171200.1.p 28 SSKKTKQKKVPQRGLGVAQLEKIRLEDQQKKAAAAVILSTPSSLSSPTKSTSS 80 45567899999************************999999999998887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence Send to blast
MAQEDQTQKC SNTSSGASLG FASITRSSSK KTKQKKVPQR GLGVAQLEKI RLEDQQKKAA 60 AAVILSTPSS LSSPTKSTSS SCPSVPIRHF YHSNHNQPPS SIPFPSLPSL DLPSPNSIFR 120 PPLIPTQNID VIRKPISTVP LGNNNNNNGG HGFEIQGHGN NNVPNLWNPC DFNLDQKESS 180 NSGIDPGLAF RSTLNLPFES NNPIWPLTNV PQRTQPYHQQ PPPPPPSMVN VSSATSSSSV 240 LNFQIEPPSN QSYYSNYTPM WPDEEKMVGM KRPYPFSLDN PPGPSINFKF PTFVAPMRAD 300 EASSCGNRYT FNLEPSGNPI FREAPSCSTS ISESNSRNSI KENGSVNGDF LTLAPPTTSS 360 RTCPSPKLNL PSTYLAFHNR EVPEFESFSY QGNAEDTNFQ PGPSFSHPQQ AFYSFFPPAK 420 AQIGRAATTI NNNCNGELGE SVDLNLKL*

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence Send to blast

MAQEDQTQKC SNTSSGASLG FASITRSSSK KTKQKKVPQR GLGVAQLEKI RLEDQQKKAA  60
AAVILSTPSS LSSPTKSTSS SCPSVPIRHF YHSNHNQPPS SIPFPSLPSL DLPSPNSIFR  120
PPLIPTQNID VIRKPISTVP LGNNNNNNGG HGFEIQGHGN NNVPNLWNPC DFNLDQKESS  180
NSGIDPGLAF RSTLNLPFES NNPIWPLTNV PQRTQPYHQQ PPPPPPSMVN VSSATSSSSV  240
LNFQIEPPSN QSYYSNYTPM WPDEEKMVGM KRPYPFSLDN PPGPSINFKF PTFVAPMRAD  300
EASSCGNRYT FNLEPSGNPI FREAPSCSTS ISESNSRNSI KENGSVNGDF LTLAPPTTSS  360
RTCPSPKLNL PSTYLAFHNR EVPEFESFSY QGNAEDTNFQ PGPSFSHPQQ AFYSFFPPAK  420
AQIGRAATTI NNNCNGELGE SVDLNLKL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.4G171200.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007211627.1	0.0	uncharacterized protein LOC18778623
TrEMBL	M5WHS4	0.0	M5WHS4_PRUPE; Uncharacterized protein
STRING	EMJ12826	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13

Link Out ? help Back to Top
Phytozome	Prupe.4G171200.1.p
Entrez Gene	18778623