PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G126800.1.p | ||||||||
Common Name | PRUPE_ppa017765mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 354aa MW: 40265.6 Da PI: 4.5151 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.4 | 9.1e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppGfrFhPtdeelv +yL +k++g ++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd Prupe.4G126800.1.p 6 LPPGFRFHPTDEELVAYYLDRKINGLTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKD 95 79****************************.99**************96435566888********************************* PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v s ++++vg+kktLv+y+grap+g +t+Wvmheyrl Prupe.4G126800.1.p 96 RAVNS-QRRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 *****.8999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.36E-64 | 3 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.431 | 6 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.2E-29 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence Send to blast |
MAPMSLPPGF RFHPTDEELV AYYLDRKING LTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVNS QRRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVDSVCGN ASSSLKDSYA LCRVFKKTIQ MPKNNKEEKP IGIDNAENDS 180 VWVSSNEQLL MEDNSGINET ASRGIETDQD ENYSNHDYPK FLSDTSSSDL TQGTPTENGM 240 ADDFQAPFAS DEANSSAHLS FGVHCSSNLI DQETYIPHNE SLLNNYQFPY PPLELEDFPQ 300 INLAAETNAS KPEIIDDYMS YDKFKDYMNG TFEEIFSLCS SQDNSAALPM QEL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-60 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_B | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_C | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_D | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_A | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_B | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_C | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_D | 4e-60 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
4dul_A | 3e-60 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 3e-60 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00205 | DAP | Transfer from AT1G54330 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G126800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007214075.1 | 0.0 | NAC domain-containing protein 86 | ||||
TrEMBL | M5WNI4 | 0.0 | M5WNI4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ15274 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10508 | 33 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54330.1 | 1e-109 | NAC domain containing protein 20 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G126800.1.p |
Entrez Gene | 18778986 |