PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G062400.3.p | ||||||||
Common Name | PRUPE_ppa014847mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 418aa MW: 48400.9 Da PI: 8.3715 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101 | 7.6e-32 | 88 | 141 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Prupe.4G062400.3.p 88 PRLRWTPQLHLSFVHAVERLGGQDRATPKLVLQLMNVKGLSISHVKSHLQMYRS 141 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.81 | 84 | 144 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.8E-30 | 84 | 142 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.99E-15 | 86 | 142 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.0E-22 | 88 | 143 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.1E-8 | 89 | 140 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence Send to blast |
MTNEKDYGDQ EENTSEGSSQ LKCSSFDLNE EAGSDNCDDT KVEEFELSVD EDDEKRGQGN 60 INSSTASSAE GNERRRGKVR QYVRSKMPRL RWTPQLHLSF VHAVERLGGQ DRATPKLVLQ 120 LMNVKGLSIS HVKSHLQMYR SKKLDGDGQV VSEKQESTRG RDHIACMLHQ TIKQPRQHVY 180 FRTDNGGIVV ATPSHDHRQP LHSDFKPNVP RSSCSLLNEE VVQGNKSMDM TVRSTTVPIN 240 PSRFLEEKKW PPFGMINKQQ CWRAKRFPAK VSWSHNYNGS QSDHLVRHMR TTPRLNNEQF 300 FHNTRSTEWN LGENKNTRRF PSNSYNSISN SSCHKTEFEP PFRLELNEEK ILKYKEWMPE 360 LELGLSQRVE NHEKTIFQHQ MVSEEAYETA QRIKQNYYKE LEDRSKQEIS TKLSLSL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 9e-17 | 89 | 143 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 9e-17 | 89 | 143 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 9e-17 | 89 | 143 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 9e-17 | 89 | 143 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-16 | 89 | 143 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G062400.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020417576.1 | 0.0 | putative two-component response regulator ARR21 | ||||
Refseq | XP_020417577.1 | 0.0 | putative two-component response regulator ARR21 | ||||
Refseq | XP_020417578.1 | 0.0 | putative two-component response regulator ARR21 | ||||
TrEMBL | A0A251PGL8 | 0.0 | A0A251PGL8_PRUPE; Uncharacterized protein | ||||
STRING | XP_008225297.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 7e-36 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G062400.3.p |
Entrez Gene | 18779555 |