PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G061800.3.p | ||||||||
Common Name | PRUPE_ppa008833mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 304aa MW: 33920.7 Da PI: 4.8949 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49.5 | 1.1e-15 | 32 | 123 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +L++a ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ ++k+yk + ++ ++ + + +s++p+f++l+ Prupe.4G061800.3.p 32 CWSEDATSTLVDAWGRRYLELNRGCLRQKDWQEVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKFEMNRVSSSNGTLTSSWPFFERLD 122 7****************************************99999*********************9988888887788889******98 PP trihelix 87 a 87 a Prupe.4G061800.3.p 123 A 123 5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.8E-25 | 30 | 124 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MGDLTDPQMT PSHATATTPS SNPRPMPVRE DCWSEDATST LVDAWGRRYL ELNRGCLRQK 60 DWQEVADAVN ALHGHTKKTH RTDVQCKNRI DTIKKKYKFE MNRVSSSNGT LTSSWPFFER 120 LDALIGSNYK KPSPSPPVAV PLPLGYRKTP SPATVVTAVG LPQKRSASSA AVDEGFFRMN 180 YSAVAAAAAA EAEDDDDEDE DEDDEVNYEV DEEVEMERER DSGGEIGGGG GGEGLKRLAR 240 AIERFGEVYQ RVEAEKLRQM VDLEKQRMQF ANDLEVQRMN MFMDTQVQLE RIKHGKRSGS 300 NGW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G061800.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020418401.1 | 0.0 | trihelix transcription factor ASIL2 isoform X2 | ||||
TrEMBL | A0A251PI07 | 0.0 | A0A251PI07_PRUPE; Uncharacterized protein | ||||
STRING | EMJ12844 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 1e-37 | sequence-specific DNA binding transcription factors |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G061800.3.p |
Entrez Gene | 18779682 |