PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G003900.1.p
Common NamePRUPE_ppa026454mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 376aa    MW: 42695.2 Da    PI: 6.8473
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G003900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix85.28e-27253338186
            trihelix   1 rWtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         rW++ ev+ Li++r  +e+++r +g++k+p Wee+s  m + g++rs+ +Ckekwen+nk++k+   ++kkr s + +tcpyf++le
  Prupe.4G003900.1.p 253 RWPEAEVQSLITLRAALEHKFRiAGNSKGPIWEEISLGMCDMGYNRSARKCKEKWENINKYFKRSMGTDKKR-SANAKTCPYFQELE 338
                         8*********************559**********************************************8.67778*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.818246311IPR017877Myb-like domain
PfamPF138371.6E-19252338No hitNo description
CDDcd122038.92E-24252317No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MEALTADRHI PNPAAFPEQI APFPESTDHH LLFANPTALV HSPPQKLRPI RCSSGRCPAI  60
ELPDSAGNLG DGGPAHVGSG TWGDEGENES SSSPDEDGDE YLKTEGTERM KRKRKRRSRT  120
GGRFERVEIF LESLIMKVME KQEQMHKQLI EMIEKREKER IAREEAWKQQ ELDRMKRDEE  180
IRAQETSRSL TLISFIQNFL GHEIQVPKPA PAPAPISVVP NYDHRCMDEN GVADNGIQRD  240
MMVMIKCDQT NRRWPEAEVQ SLITLRAALE HKFRIAGNSK GPIWEEISLG MCDMGYNRSA  300
RKCKEKWENI NKYFKRSMGT DKKRSANAKT CPYFQELELL HKSGLVSSED GFKCTSNQNE  360
AKIEKQDNSE KGVTE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110116KRKRKRR
2111116RKRKRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00552DAPTransfer from AT5G47660Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G003900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007213383.10.0trihelix transcription factor GTL1
TrEMBLM5WLA50.0M5WLA5_PRUPE; Uncharacterized protein
STRINGEMJ145820.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111123338
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.12e-38Trihelix family protein