PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.4G000700.4.p | ||||||||
Common Name | PRUPE_ppa009121mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 307aa MW: 33868.1 Da PI: 6.5886 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 108 | 5.1e-34 | 18 | 72 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Prupe.4G000700.4.p 18 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.485 | 15 | 75 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 7.53E-18 | 17 | 72 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.1E-32 | 17 | 73 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-25 | 18 | 73 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.2E-9 | 20 | 71 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 1.6E-23 | 104 | 150 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence Send to blast |
MDPINGGNSL NNPNLASKQR LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI 60 YHVKSHLQKY RLAKYLPDSS SDGKKADKKE PGDVLSNLDG SSGMQITEAL KLQMEVQKRL 120 HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LSGVHSEAPG SGHLARLSDD NCPESDNKTD 180 PATPAPTSEC PLEDKAAKEC TPAKSLSIDE SFSSRHEPLT PDSACHVDSP AESPKAEVSM 240 KKRRVIMGEA FTDPEVVLTH QILESSLNSS YQQAHTTFLP REQFDPSSGI SFRNEKILEK 300 VVGSDM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 9e-24 | 18 | 75 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 9e-24 | 18 | 75 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 9e-24 | 18 | 75 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 9e-24 | 18 | 75 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 9e-24 | 18 | 75 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.1747 | 1e-117 | fruit |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00252 | DAP | Transfer from AT2G01060 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.4G000700.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007211673.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_020417262.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_020417263.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_020417264.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_020417265.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_020417266.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_020417267.1 | 0.0 | myb family transcription factor PHL7 isoform X1 | ||||
Swissprot | Q9SJW0 | 1e-133 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | M5WGF1 | 0.0 | M5WGF1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ12872 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 1e-111 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.4G000700.4.p |
Entrez Gene | 18780665 |