PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G271200.1.p
Common NamePRUPE_ppa022978mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 403aa    MW: 45275 Da    PI: 8.681
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G271200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2378.3e-1267123155
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         s+++GV++++++gr++A+++d  s+n   k+k  + g ++ +e Aa+a++ a++k++g
  Prupe.3G271200.1.p  67 SRFRGVSRHRWTGRFEAHLWDkLSWNAtqKKKGKQ-GAYDEEESAARAYDLAALKYWG 123
                         789******************88889994446666.********************98 PP
2AP252.31.4e-16166217155
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  Prupe.3G271200.1.p 166 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 217
                         89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.72E-1667133No hitNo description
SuperFamilySSF541711.57E-1367132IPR016177DNA-binding domain
PfamPF008478.9E-967123IPR001471AP2/ERF domain
SMARTSM003801.4E-1668137IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-1168131IPR001471AP2/ERF domain
PROSITE profilePS5103217.58368131IPR001471AP2/ERF domain
PRINTSPR003672.9E-56980IPR001471AP2/ERF domain
CDDcd000182.30E-24166227No hitNo description
SuperFamilySSF541716.54E-18166227IPR016177DNA-binding domain
PfamPF008475.0E-12166217IPR001471AP2/ERF domain
SMARTSM003801.6E-26167231IPR001471AP2/ERF domain
PROSITE profilePS5103218.953167225IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-18167226IPR001471AP2/ERF domain
PRINTSPR003672.9E-5207227IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MMVKNEEKTR RLRLSTVDRE AQESRCVKRR RRDPAAVAAS CDNSQSEQHL PQKPADQTSA  60
TTMKRSSRFR GVSRHRWTGR FEAHLWDKLS WNATQKKKGK QGAYDEEESA ARAYDLAALK  120
YWGTSTFTNF AISDYEEEIE IMQTVTKEEF LASLRRKSSG FSRGVSKYRG VARHHHNGRW  180
EARIGRVFGN KYLYLGTYST QEEAARAYDI AAIEYRGINA VTNFDLSSYI RWLKPRADDP  240
IATQEPETVA EPQNIPAFMA NSYIPTEEPS FSHTNPFASG YLSSPQKQKV TRSSVPLNTG  300
SKSSSPTALG LLLQSSIFRE LVQKNANFSE DESTDGEEKK NQTQVGSDDE FSGIFYDGIR  360
DNPFVCSSNS DGDNSWSSIA STILLNQPSK ANASSDSLFF FS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G271200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007216819.10.0AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLM5X9330.0M5X933_PRUPE; Uncharacterized protein
STRINGEMJ180180.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21983283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.32e-89AP2 family protein