PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G263000.1.p
Common NamePRUPE_ppa025010mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 425aa    MW: 46904.3 Da    PI: 4.2973
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G263000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-194594255
                 AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Prupe.3G263000.1.p 45 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 94
                        789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.47E-3144101No hitNo description
SuperFamilySSF541714.18E-1945102IPR016177DNA-binding domain
SMARTSM003802.1E-3445109IPR001471AP2/ERF domain
PROSITE profilePS5103219.55945102IPR001471AP2/ERF domain
PfamPF008471.1E-134594IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-2745101IPR001471AP2/ERF domain
PRINTSPR003676.4E-84657IPR001471AP2/ERF domain
PRINTSPR003676.4E-86884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MARKRKVSDG VEDRSSSEGT MAWDEMVKEA SAAAELGGAR RARKRFVGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTFDTAEE AARAYDEAAC LLRGANTRTN FWPCSHSPSS TPALPSKITN  120
LLLQRLKARN NSSSCSAPSA PLPINHHQMQ QHADHQEEEA GADFSETQYT DFLNDPEDYI  180
TSNNHDIISA SSIDYMTSSF ESCLTEKEEY STARETDQMD YGNLSEVAQT YSGGDANFVG  240
EGSQEDMDQE EEEEVNDQVG AIDFQFVDDI GASNYYSPSP FDIADEEIEE PVEPETYADE  300
PSMLRAAMKR MKYERKFSAS LYAFNGIPEC LKLKIGSSSS SSSAGNAKGR GISESLNNLQ  360
RACNKNKEEA AAAAAKQEYQ EVVMGKKEEE ETQQSSMDIS LSSDGELSLW SSLDLQPICF  420
LSTN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G263000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007217799.10.0ethylene-responsive transcription factor RAP2-2
TrEMBLM5XBW40.0M5XBW4_PRUPE; Uncharacterized protein
STRINGEMJ189980.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33383267
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-23related to AP2 11