PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G248500.1.p | ||||||||
Common Name | PRUPE_ppa023507mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 247aa MW: 27941.7 Da PI: 5.597 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 81.3 | 1.1e-25 | 192 | 241 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 rl Wt+eLH++Fve+++ LGG+ +AtPk+i+e+m+v+gLt+++vkSHLQ Prupe.3G248500.1.p 192 SRLSWTQELHTKFVEVLSMLGGPAEATPKQIREAMQVEGLTNDQVKSHLQ 241 69************************************************ PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.571 | 188 | 246 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.15E-12 | 189 | 242 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.8E-21 | 190 | 241 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.9E-22 | 192 | 244 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.2E-6 | 193 | 241 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence Send to blast |
MGSTSNPLEL NSLDLALSLK PSYVPKSLNH LFSDLASIDN VPHKLSVLNE YLLKHQEELH 60 RVEEFKRDLP QCVLLLLDAI QTLNNEIEKL SGQDQFDACK NRGSCEDPVE RRSAFRKYKS 120 SSPPFNPRPR NQDHTSQDHK VKGKEPILME PSPRRPFPCD LNMEASGSEL ELEPEPDPQP 180 QPEVPPPMWK HSRLSWTQEL HTKFVEVLSM LGGPAEATPK QIREAMQVEG LTNDQVKSHL 240 QVGFEL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G248500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007217527.2 | 1e-177 | uncharacterized protein LOC18783336 | ||||
TrEMBL | A0A251Q548 | 1e-180 | A0A251Q548_PRUPE; Uncharacterized protein | ||||
STRING | EMJ18726 | 1e-176 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14866 | 10 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37180.1 | 3e-17 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G248500.1.p |
Entrez Gene | 18783336 |