PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G222100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | GeBP | ||||||||
Protein Properties | Length: 433aa MW: 47561.4 Da PI: 4.4882 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 102.1 | 4.7e-32 | 206 | 296 | 4 | 97 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 rlwse+Dei++L+G+i+++ k+g + + af+ef+kk+++++vsk ql++KirrLK K++kk ++ g++p+fsk+h+ k+f+lskk Prupe.3G222100.1.p 206 GRLWSEDDEIAILKGMIEYQVKNGPVTNSTMGAFHEFIKKKLQVDVSKLQLSDKIRRLKMKYQKKGEN---GEDPVFSKPHEVKSFDLSKK 293 59**********************99999**********************************99999...******************** PP DUF573 95 iWg 97 +W Prupe.3G222100.1.p 294 VWS 296 **6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.6E-29 | 207 | 296 | IPR007592 | Protein of unknown function DUF573 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005730 | Cellular Component | nucleolus |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MAQKKLLDDP PVVEDSDEET VDEETVDEEE LEEEDDAVEA EDGKAKSGDD NHDGDEEEGE 60 EDADEEDEDE EDNEEKKEKA LLTSSSAVSN SNPQWPSASE DDSGSGSETE SENNSQSPSA 120 SEFTIKPVVS KPMNDPVKPN KKNAPAKPAP ASNSGSKRPE TELNKKNAPS SSNSGSKRRA 180 ETEPNPKDSK KKKVVNSGDD DDGKKGRLWS EDDEIAILKG MIEYQVKNGP VTNSTMGAFH 240 EFIKKKLQVD VSKLQLSDKI RRLKMKYQKK GENGEDPVFS KPHEVKSFDL SKKVWSVEAN 300 GVDDNAKDSK RKPRKSSKVD KATVLALPVS DVAEKKEELN VANGGIKADP VDFWSKYPCL 360 SGSLGLDNST PRSDLTTLMV QKMPLIGKSK AKELEGKWRA LQLIEMELSV KKLALMQEQA 420 KFVLDSMKSS ED* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 176 | 192 | KRRAETEPNPKDSKKKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G222100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020416174.1 | 0.0 | STOREKEEPER protein | ||||
TrEMBL | A0A251Q790 | 0.0 | A0A251Q790_PRUPE; Uncharacterized protein | ||||
STRING | XP_008245989.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13966 | 11 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 6e-24 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G222100.1.p |