PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G222100.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 433aa    MW: 47561.4 Da    PI: 4.4882
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G222100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573102.14.7e-32206296497
              DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                          rlwse+Dei++L+G+i+++ k+g    + + af+ef+kk+++++vsk ql++KirrLK K++kk ++   g++p+fsk+h+ k+f+lskk
  Prupe.3G222100.1.p 206 GRLWSEDDEIAILKGMIEYQVKNGPVTNSTMGAFHEFIKKKLQVDVSKLQLSDKIRRLKMKYQKKGEN---GEDPVFSKPHEVKSFDLSKK 293
                         59**********************99999**********************************99999...******************** PP

              DUF573  95 iWg 97 
                         +W 
  Prupe.3G222100.1.p 294 VWS 296
                         **6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.6E-29207296IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MAQKKLLDDP PVVEDSDEET VDEETVDEEE LEEEDDAVEA EDGKAKSGDD NHDGDEEEGE  60
EDADEEDEDE EDNEEKKEKA LLTSSSAVSN SNPQWPSASE DDSGSGSETE SENNSQSPSA  120
SEFTIKPVVS KPMNDPVKPN KKNAPAKPAP ASNSGSKRPE TELNKKNAPS SSNSGSKRRA  180
ETEPNPKDSK KKKVVNSGDD DDGKKGRLWS EDDEIAILKG MIEYQVKNGP VTNSTMGAFH  240
EFIKKKLQVD VSKLQLSDKI RRLKMKYQKK GENGEDPVFS KPHEVKSFDL SKKVWSVEAN  300
GVDDNAKDSK RKPRKSSKVD KATVLALPVS DVAEKKEELN VANGGIKADP VDFWSKYPCL  360
SGSLGLDNST PRSDLTTLMV QKMPLIGKSK AKELEGKWRA LQLIEMELSV KKLALMQEQA  420
KFVLDSMKSS ED*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176192KRRAETEPNPKDSKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G222100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020416174.10.0STOREKEEPER protein
TrEMBLA0A251Q7900.0A0A251Q790_PRUPE; Uncharacterized protein
STRINGXP_008245989.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139661119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.16e-24DNA-binding storekeeper protein-related transcriptional regulator