PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G220900.1.p
Common NamePRUPE_ppa025622mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CO-like
Protein Properties Length: 441aa    MW: 47885.4 Da    PI: 5.9371
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G220900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box25.62.5e-084690439
            zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg.........Htv 39
                          C++++ +++   C d +  lC++C ++ H++         H++
  Prupe.3G220900.1.p 46 LLCDKCNAQPAMVRCMDEKLSLCQSCDQWNHNNgdtttgmvgHRT 90
                        57*****************************88877777777665 PP
2CCT63.47.2e-22384427144
                 CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                         R++a++RYkeK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ 
  Prupe.3G220900.1.p 384 RDKAKMRYKEKKKTRMFGKQIRYASRKARADTRKRVKGRFVKAG 427
                         899**************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003361.4E-4147IPR000315B-box-type zinc finger
CDDcd000210.00302347No hitNo description
PROSITE profilePS501198.8024393IPR000315B-box-type zinc finger
PfamPF062034.4E-17384426IPR010402CCT domain
PROSITE profilePS5101714.981384426IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MEPLCEFCGV VRAVVYCKSD LARLCLHCDG CVHSANILSR RHPRSLLCDK CNAQPAMVRC  60
MDEKLSLCQS CDQWNHNNGD TTTGMVGHRT HALTCYTGCP SLSEFSRIWS SVLDGSSSSG  120
FETNGGGGGG GGNNNWDQSL GSAQVPINDQ TNCIGNALER RDNSERSFGV VTSKLSGSLD  180
QSSCAKFEPW MARSTVISAN PNGIPQGNKD QAPFLPQESS LSKDSNDLCD GLNIDDVPLN  240
FENAEGIFSC PQGPSRYQFE DGEMDCLLME KNLSVTESNG PNDNAVQASS SGPQDCVAFQ  300
SSCGSDNVMP AMNGSANCLL MNPTCSRNIN LGFPTGQVHS SMSLSLSSMS RESNPDYQDC  360
GLSPIFLTGE PWDSAMEASS PQARDKAKMR YKEKKKTRMF GKQIRYASRK ARADTRKRVK  420
GRFVKAGEEY DYDPLVTRNF *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G220900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016649171.10.0PREDICTED: putative zinc finger protein CONSTANS-LIKE 11 isoform X2
TrEMBLA0A251Q3W90.0A0A251Q3W9_PRUPE; Uncharacterized protein
STRINGEMJ179300.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF70521923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21880.13e-82B-box type zinc finger protein with CCT domain