PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G192100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 370aa MW: 41365.8 Da PI: 4.6879 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100 | 1.6e-31 | 104 | 158 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp LH++Fv+a++qLGG++kAtPk++l+ m+vkg+tl+h+kSHLQkYRl Prupe.3G192100.1.p 104 KPRLRWTPHLHACFVDAINQLGGPHKATPKKLLQKMGVKGITLYHLKSHLQKYRL 158 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 3.9E-23 | 104 | 159 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 9.5E-29 | 104 | 158 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.73E-15 | 104 | 158 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 3.8E-6 | 106 | 157 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 370 aa Download sequence Send to blast |
MFHRGGGGGG SGVPNHTYNS QLLRAAALQP REEEEEKERM VGCGFDYFGD NEQDFQGPPT 60 PTVTQSDDSV VVEGEEEEEE EEEEEEEDLS HDLQTPSVLS SNFKPRLRWT PHLHACFVDA 120 INQLGGPHKA TPKKLLQKMG VKGITLYHLK SHLQKYRLGK YSVKEWKEVP ETFSQDFEGR 180 SVSSTSLCSS RSQKKHSSKL IKKALTQTEV EEKLGLQIEA EKRLKLRQDA ERRYMDYALD 240 NACKKLADQF LGSVAVDSAG VFRKDVAGLG TMVSIISQKD QFLPYDLSKE TSMQLSLEDQ 300 LGGFEAQREA YHETEGHLIS HGNSENSSVE DFQILADDDK IMEQSLDNDP AEAYLVLDTA 360 EMGTSSHRT* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-19 | 104 | 161 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-19 | 104 | 161 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-19 | 104 | 161 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-19 | 104 | 161 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 5e-19 | 104 | 161 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 193 | 202 | KKHSSKLIKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G192100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020414715.1 | 0.0 | protein PHR1-LIKE 2 | ||||
Refseq | XP_020414716.1 | 0.0 | protein PHR1-LIKE 2 | ||||
TrEMBL | A0A251Q2J3 | 0.0 | A0A251Q2J3_PRUPE; Uncharacterized protein | ||||
STRING | XP_008229755.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18901 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13640.1 | 4e-39 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G192100.1.p |