PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G161700.1.p
Common NamePRUPE_ppa009321mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 298aa    MW: 33458.7 Da    PI: 7.8993
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G161700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573766.5e-2462155397
              DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                          +r+w+e De+++LqGl+d++++   s  +d++ fy  ++  +s +++ksql+eK+rr++kKf+  +++ ++g + s  ++hd+  ++ls+
  Prupe.3G161700.1.p  62 YHRIWTEPDELLFLQGLLDCASDSF-SFPKDLHLFYARFSTTVSQHYTKSQLSEKLRRFRKKFRVVSARLARGLHESQLSPHDRALYDLSR 151
                         68******************77655.8888************************************************************* PP

              DUF573  94 kiWg 97 
                         k+W 
  Prupe.3G161700.1.p 152 KLWS 155
                         ***7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-2563155IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MDSIKPSFAT KLPIKRKNPD PIPNLNPNPN LLPPTLESTA IYDYNAVGFS GEDGQRIPPF  60
KYHRIWTEPD ELLFLQGLLD CASDSFSFPK DLHLFYARFS TTVSQHYTKS QLSEKLRRFR  120
KKFRVVSARL ARGLHESQLS PHDRALYDLS RKLWSSECWS TSPFGNKAKS DEGDDNLMVN  180
QNQSVLDDLF VENDYGDDVK INLSRAIAGQ AAKTVLDVFD QSLNEVRRVL VQRCLLCSDH  240
VGSVSGSGSG FGSGSCSSNK GKTALDFEQQ WQLQRLAELD VLSQRLRLVL DNTIRGQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.92590.0fruit| shoot
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G161700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007215750.10.0uncharacterized protein LOC18781678
TrEMBLM5WTC20.0M5WTC2_PRUPE; Uncharacterized protein
STRINGEMJ169490.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1654199
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.15e-12DNA-binding storekeeper protein-related transcriptional regulator