PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G157100.1.p | ||||||||
Common Name | PRUPE_ppa021711mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 462aa MW: 51713 Da PI: 6.3279 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.8e-19 | 217 | 267 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge Prupe.3G157100.1.p 217 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 267 59******9.**********955...5**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.62E-33 | 216 | 276 | No hit | No description |
SuperFamily | SSF54171 | 7.19E-23 | 217 | 275 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.9E-32 | 217 | 275 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.998 | 217 | 274 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.5E-40 | 217 | 280 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.3E-11 | 218 | 229 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.7E-12 | 218 | 267 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.3E-11 | 240 | 256 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:2000070 | Biological Process | regulation of response to water deprivation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence Send to blast |
MAAAKKSGKS KKGVEESEME TSLDWEINED KDLGFSFESQ PWKLGFNEAS MMSKRPLKKI 60 KSPERQDPIQ SSASSAHQAT SSTTPCPSSS SSRIVFPFAF DGSQQPVQFP NQFNTTAVPI 120 YPSPFSQQQQ QQQNQQQMIS FASQQQQQQQ QHGMSYPPPF LGDSTTWQQQ QQHQILQYWS 180 DALNLSPRGR VMMMNRLGPD GRPLFRPPAM PYNTTKLYRG VRQRHWGKWV AEIRLPRNRT 240 RLWLGTFDTA EDAAMAYDRE AFKLRGENAR LNFPELFLNK DNTSVSTAPS STATSPTAHE 300 SSMPTTTRNR KQSRKVQKNP KASNTEAMPP PPPPQAHTEE DNTDDDSGLG SSEAKTSDEF 360 QANMNAAGGG NSQPEELVWG DMAEAWMNAI PAGWGPGSPV WDDLDTNNNL LLQSHLPFTN 420 PNQQNFNNIC PELERQQDHS GSASSSSSSY PLKNFFWKDQ D* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-20 | 216 | 274 | 1 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G157100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007216848.1 | 0.0 | ethylene-responsive transcription factor ERF053 | ||||
TrEMBL | M5WW71 | 0.0 | M5WW71_PRUPE; Uncharacterized protein | ||||
STRING | EMJ18047 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4268 | 32 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20880.1 | 2e-55 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G157100.1.p |
Entrez Gene | 18781642 |