PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.3G127200.1.p | ||||||||
Common Name | PRUPE_ppa005551mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | VOZ | ||||||||
Protein Properties | Length: 456aa MW: 50626.8 Da PI: 5.2694 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 395.8 | 1e-121 | 207 | 421 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwn 91 pp saflgpkca+w+c+rpa s+++q++css ha lalnegl+g p+lrp+gi lkd++lfaal+ak+qgk+vgip+cegaat k+pwn Prupe.3G127200.1.p 207 PPVSAFLGPKCAFWECSRPA--SNRCQNFCSSGHALLALNEGLLGRPPILRPGGIALKDSSLFAALNAKTQGKDVGIPNCEGAATLKCPWN 295 788****************8..689****************************************************************** PP VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182 a+elfdls+l+getirewlff kprrafesgnrkqrslpdy+grgwhesrkqvmkefgg+krsyymdpqpss ewhl+eye+n++da+al Prupe.3G127200.1.p 296 APELFDLSFLDGETIREWLFFGKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGHKRSYYMDPQPSSDREWHLFEYEVNNSDACAL 386 ******************************************************************************************* PP VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217 yrlelk +kks+kgkvs+d+ladlqkk+grlta Prupe.3G127200.1.p 387 YRLELKFGSAKKSSKGKVSSDPLADLQKKMGRLTA 421 *********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 456 aa Download sequence Send to blast |
MLKGSKGKCE SPSHKLLKEK TKTRLEDLQG MLTNVQAAKK ESGTDDIVIL MEQANQMVRE 60 WRAELNEPSP ASSLLGGSLG SFCEEELARV LKHLDEEDDA TSQLKQLPPS MPESDLLNLH 120 SSNMLAFKEE FFVSKEPEED IFQGFDQCYT ASNLQNTMVD NSDLTTQLKY HHFDFHEDLD 180 EGLFIEGNNI TQSEEDVVPN VLPDICPPVS AFLGPKCAFW ECSRPASNRC QNFCSSGHAL 240 LALNEGLLGR PPILRPGGIA LKDSSLFAAL NAKTQGKDVG IPNCEGAATL KCPWNAPELF 300 DLSFLDGETI REWLFFGKPR RAFESGNRKQ RSLPDYNGRG WHESRKQVMK EFGGHKRSYY 360 MDPQPSSDRE WHLFEYEVNN SDACALYRLE LKFGSAKKSS KGKVSSDPLA DLQKKMGRLT 420 AEVPTDDASN VKGKASTKAD AGNIFSSHNQ TTSTT* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.13642 | 0.0 | fruit |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.3G127200.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007211619.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Refseq | XP_020414917.1 | 0.0 | transcription factor VOZ1 isoform X1 | ||||
Swissprot | Q9SGQ0 | 1e-163 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | M5WU25 | 0.0 | M5WU25_PRUPE; Uncharacterized protein | ||||
STRING | EMJ12818 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1498 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-143 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.3G127200.1.p |
Entrez Gene | 18780963 |
Publications ? help Back to Top | |||
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