PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G108700.1.p
Common NamePRUPE_ppa015468mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 438aa    MW: 49855.8 Da    PI: 4.9211
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G108700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.72.6e-35141042101
                         HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXX CS
        HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkke 92 
                         Fl+k+y++++d++ ++++swse+g sfvv+d++efak++Lp yFkh+nf+SFvRQLn+YgF+k++ e+         weF++++F +g ++
  Prupe.3G108700.1.p  14 FLTKTYDLVDDPSSNRVVSWSETGCSFVVWDPTEFAKEMLPMYFKHNNFSSFVRQLNTYGFRKIDPEQ---------WEFANEEFLRGGRH 95 
                         9***************************************************************9998.........************** PP

                         XXXXXXXXX CS
        HSF_DNA-bind  93 llekikrkk 101
                         ll+ki+r+k
  Prupe.3G108700.1.p  96 LLKKIHRRK 104
                         *******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004157.2E-5910103IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467852.12E-3410103IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.102.1E-3711103IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000568.2E-201437IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004472.0E-3114103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.2E-205264IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405377IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.2E-206577IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MEGTQGGSNA PAPFLTKTYD LVDDPSSNRV VSWSETGCSF VVWDPTEFAK EMLPMYFKHN  60
NFSSFVRQLN TYGFRKIDPE QWEFANEEFL RGGRHLLKKI HRRKPIHSHS MQNHEYSSVP  120
LSETEREEYE KKINRLNHDK SLLELELQRH QRENQEFDYQ IQILQEQLQK MEHQQKQYTT  180
FLAQLLQKPG LASILMQKSE IHNKKRRLLT SSHFPDDFKM EILNLNTLNE NLGTISTPII  240
KFDQLEKMES SLNFWEDFLH GIGEAMPEEL NDIGSLSQAS PIIVTEIQDP GMNSRPCSPR  300
SRLSSPNSMN VSSPEVVGSA NFLDILAITS TCHNVDFRPK SSGIDMNSKP DSAPAAEALK  360
EMVQEMKNAE PAAANDMFWE QCLTETPGLD DAQEVQSERG DSDGGVSDTN PAIQKKLWWN  420
TDVDNFTNQI GRLTPAS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B1e-25310319129Heat shock factor protein 1
5d5v_B1e-25310319129Heat shock factor protein 1
5d5v_D1e-25310319129Heat shock factor protein 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G108700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007216966.20.0heat stress transcription factor A-4c isoform X1
TrEMBLA0A251PYE80.0A0A251PYE8_PRUPE; Uncharacterized protein
STRINGEMJ181650.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF141001620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45710.12e-79HSF family protein