PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G094700.1.p
Common NamePRUPE_ppa020928mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 290aa    MW: 31781 Da    PI: 10.0172
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G094700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.4e-20148198256
                 AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++ a+++l+g+
  Prupe.3G094700.1.p 148 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDSAARRLRGA 198
                         59*******.**********32....25**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.71E-33147206No hitNo description
PROSITE profilePS5103222.748148205IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-21148205IPR016177DNA-binding domain
PfamPF008478.1E-14148197IPR001471AP2/ERF domain
SMARTSM003801.1E-31148211IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-29148205IPR001471AP2/ERF domain
PRINTSPR003671.2E-10149160IPR001471AP2/ERF domain
PRINTSPR003671.2E-10171187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MASVPFCRNP LTFHAPEKFR FLSEANSLYE SFFNKTHFSV SSVSSPNQLN IFNPPCHTNV  60
SAEIPICGVS GKESESQTGT PPVLDGIAAV VGQHVLYGSQ KTCNVPTNGE TTQIPEFGYC  120
SERIGSAETS KKDADNKKGI GNLSVQKNYR GVRKRPWGRW SAEIRDRIGR CRHWLGTFDT  180
AEEAARAYDS AARRLRGAKA RTNFEIPSVF PLSSPCSSSS SSDAKRVIRG KNNIKGLKSK  240
RKCSVVTCVA HLFSEAPTHL RSQVMEIKEN VELDLKLGVR KSDIGKTTP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-18147206161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G094700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007217568.20.0ethylene-responsive transcription factor ERF084
TrEMBLM5WY960.0M5WY96_PRUPE; Uncharacterized protein
STRINGEMJ187670.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130232631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.13e-22ERF family protein