PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G085900.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 326aa    MW: 36390 Da    PI: 8.7316
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G085900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-171562148
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                        +g+WT+ Ed++l+  v+++G g W + +++ g+ R++k+c++rw++yl
  Prupe.3G085900.1.p 15 KGPWTPAEDQKLLAFVQKHGHGKWQSLPQKAGLQRCGKSCRLRWRNYL 62
                        79*********************************************7 PP
2Myb_DNA-binding45.61.7e-1468111146
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                         rg+++ +Ed  +++++++lG++ W++I ++++ +Rt++++k++w++
  Prupe.3G085900.1.p  68 RGNFSLQEDTTIIQLHALLGNR-WSAITAHLP-KRTDNEVKNYWHS 111
                         89********************.*********.***********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.4E-25765IPR009057Homeodomain-like
PROSITE profilePS5129423.3011066IPR017930Myb domain
SuperFamilySSF466899.17E-3112109IPR009057Homeodomain-like
SMARTSM007177.2E-141464IPR001005SANT/Myb domain
PfamPF002493.0E-161562IPR001005SANT/Myb domain
CDDcd001676.73E-121762No hitNo description
Gene3DG3DSA:1.10.10.601.4E-2366117IPR009057Homeodomain-like
PROSITE profilePS5129418.13967117IPR017930Myb domain
SMARTSM007171.6E-1367115IPR001005SANT/Myb domain
PfamPF002493.0E-1368111IPR001005SANT/Myb domain
CDDcd001673.36E-970113No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MGKSTHCVAS SGMKKGPWTP AEDQKLLAFV QKHGHGKWQS LPQKAGLQRC GKSCRLRWRN  60
YLRPDIKRGN FSLQEDTTII QLHALLGNRW SAITAHLPKR TDNEVKNYWH SRLKKRLALK  120
GYDPVTHKPK TTIFGFANGS TDDPKTGSNL NHIAQWESAR LQAEARFVRD SELHKQAYHP  180
YNNNDISAAS SILLGHNKDF RPTDQLFGQN APQCLDILRA WESMLMSNYS KAAGGQDHVN  240
SFGNHLAGDF EPPIISAISS NGSSLMDCFF HEPVGQCFDE NYGTSITEPF ATVHHKNNGA  300
CLEDFGLWEI IMQGKNDCPI SGISM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A8e-27131175108B-MYB
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}.
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G085900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414915.10.0transcription factor MYB32
SwissprotQ9LE631e-82MY106_ARATH; Transcription factor MYB106
TrEMBLA0A251PXC70.0A0A251PXC7_PRUPE; Uncharacterized protein
STRINGXP_008243872.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1903726
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.18e-84myb domain protein 106