PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G085700.1.p
Common NamePRUPE_ppa017235mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 321aa    MW: 35959.5 Da    PI: 8.6548
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G085700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.7e-181663148
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                        +g+WT+ Ed++l+  v+++G g+W + +++ g+ R++k+c++rw++yl
  Prupe.3G085700.1.p 16 KGPWTPAEDQKLLAFVQKHGHGNWQSLPQKAGLQRCGKSCRLRWRNYL 63
                        79*********************************************7 PP
2Myb_DNA-binding43.95.5e-1469112146
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                         rg+++  Ed+ +++++++lG++ W++I ++++ +Rt++++k++w++
  Prupe.3G085700.1.p  69 RGNFSLLEDQTIIQLHALLGNR-WSAITAHLP-KRTDNEVKNYWHS 112
                         899*******************.*********.***********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-24866IPR009057Homeodomain-like
PROSITE profilePS5129424.1391167IPR017930Myb domain
SuperFamilySSF466895.99E-3113110IPR009057Homeodomain-like
SMARTSM007171.9E-141565IPR001005SANT/Myb domain
PfamPF002495.4E-171663IPR001005SANT/Myb domain
CDDcd001672.11E-121863No hitNo description
Gene3DG3DSA:1.10.10.608.0E-2367118IPR009057Homeodomain-like
PROSITE profilePS5129416.72268118IPR017930Myb domain
SMARTSM007171.2E-1268116IPR001005SANT/Myb domain
PfamPF002499.5E-1369112IPR001005SANT/Myb domain
CDDcd001676.27E-971114No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MGKSTHDCVA SSGVKKGPWT PAEDQKLLAF VQKHGHGNWQ SLPQKAGLQR CGKSCRLRWR  60
NYLRPDIQRG NFSLLEDQTI IQLHALLGNR WSAITAHLPK RTDNEVKNYW HSRLKKRLAL  120
KGYDPVTHKP KTTIFGFANG STDDPKTGSN LNHIAQWESA RLQAEARYVR DSELHKQAYH  180
PYYNNDISAA SSILLGHNKD FGPTDQLFGQ NAPQCLDILR AWESMLMSNY SKAAGGQDHV  240
NSFGNHLAGD FEPPIISAIS SNGSSLMDCF FHEPVGQCFD ENYGTSITEP FATVHHKNNG  300
ACLEDFGLWE IIMQRKKTIV *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-26161187108B-MYB
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}.
Functional Description ? help Back to Top
Source Description
UniProtFunctions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G085700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007216257.10.0transcription factor MYB32
SwissprotQ9LE632e-80MY106_ARATH; Transcription factor MYB106
TrEMBLM5WW360.0M5WW36_PRUPE; Uncharacterized protein
STRINGEMJ174560.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1903726
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.18e-82myb domain protein 106