PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G078800.7.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 787aa    MW: 86330.1 Da    PI: 6.5006
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G078800.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR47.53.5e-15513551341
                 TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                         +k+CnC++skClk+YCeCfaag++C ++C C +C Nk e
  Prupe.3G078800.7.p 513 CKRCNCRRSKCLKLYCECFAAGVYCVDSCACVNCYNKPE 551
                         89**********************************975 PP
2TCR52.21.2e-16599637139
                 TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                         ++k+gCnCkkskClk+YCeCf+a++ Cs+ C+Ce+CkN+
  Prupe.3G078800.7.p 599 RHKRGCNCKKSKCLKRYCECFQAKVGCSSACRCEGCKNT 637
                         589***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.0E-15511552IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163435.241512639IPR005172CRC domain
PfamPF036382.3E-11514549IPR005172CRC domain
SMARTSM011141.2E-16599640IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.9E-12601637IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 787 aa     Download sequence    Send to blast
MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP  60
VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY  120
LADPVEVDST WSADLRSQRT NEVPRLLHSG FAPGEESNTE VCDIMFGSPE NEAVLLSDQA  180
EKNLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVKESDV NACLVSRAQN CGENAAKVNL  240
HRAGCQYDEK NASSQSREDS NECKQRVQKG FVKEGGQNER GIRRHLQFEA AKAYKFTILG  300
NSESPNSLTH DATNSRSPSI LTNLKSLASS HFDNRASSSL QDVSCDTLQF PSSPYESFTS  360
AQIGVNSTTS APIHSVIGLH LNRISRSTSL SSDIFSSKKS IGYLSMPEQM LEHGSNNIAT  420
NSSSILTSAV SGKIYVHVAS GQQESQAVTE ANSFTFHSTD TMKPPCHSML VDQETAPCEV  480
GMSASQETDE VEELNQLSPK RKRRRDAYMS EGCKRCNCRR SKCLKLYCEC FAAGVYCVDS  540
CACVNCYNKP EFEDTVLDIR QQIEARNPLA FTPKVVDNAI DSSPNFTEEQ DLTTPSSARH  600
KRGCNCKKSK CLKRYCECFQ AKVGCSSACR CEGCKNTFGV TPEPVYNRAK KWEAHPAEKL  660
DNVKGAIACI KAPAFSSASS SNSAKIPQAQ LPSSQLQPSG AHYDIPYDDT PEILEETSNP  720
TKVVRASSPN QKRVSPPQSR SRLRERSPTG LRSGRKFILQ AMPSFPPLTP HRNSKEGTNE  780
IENDDK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A1e-1751464312126Protein lin-54 homolog
5fd3_B1e-1751464312126Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1499504KRKRRR
2500504RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G078800.7.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414497.10.0protein tesmin/TSO1-like CXC 3 isoform X6
TrEMBLA0A251PX030.0A0A251PX03_PRUPE; Uncharacterized protein
TrEMBLA0A251PYA50.0A0A251PYA5_PRUPE; Uncharacterized protein
STRINGEMJ178940.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.14e-60TESMIN/TSO1-like CXC 2