PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G078800.14.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 813aa    MW: 89195.4 Da    PI: 6.5845
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G078800.14.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR47.53.7e-15511549341
                  TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                          +k+CnC++skClk+YCeCfaag++C ++C C +C Nk e
  Prupe.3G078800.14.p 511 CKRCNCRRSKCLKLYCECFAAGVYCVDSCACVNCYNKPE 549
                          89**********************************975 PP
2TCR52.21.2e-16597635139
                  TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                          ++k+gCnCkkskClk+YCeCf+a++ Cs+ C+Ce+CkN+
  Prupe.3G078800.14.p 597 RHKRGCNCKKSKCLKRYCECFQAKVGCSSACRCEGCKNT 635
                          589***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.0E-15509550IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163435.241510637IPR005172CRC domain
PfamPF036382.4E-11512547IPR005172CRC domain
SMARTSM011141.2E-16597638IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.9E-12599635IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 813 aa     Download sequence    Send to blast
MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP  60
VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY  120
LADPVEVDST WSADLRSQRT NEVPRLLHSG FAPGEESNTE VCDIMFGSPE NEAVLLSDQA  180
EKNLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVKESDV NACLVSRAQN CGENAAKLHR  240
AGCQYDEKNA SSQSREDSNE CKQRVQKGFV KEGGQNERGI RRHLQFEAAK AYKFTILGNS  300
ESPNSLTHDA TNSRSPSILT NLKSLASSHF DNRASSSLQD VSCDTLQFPS SPYESFTSAQ  360
IGVNSTTSAP IHSVIGLHLN RISRSTSLSS DIFSSKKSIG YLSMPEQMLE HGSNNIATNS  420
SSILTSAVSG KIYVHVASGQ QESQAVTEAN SFTFHSTDTM KPPCHSMLVD QETAPCEVGM  480
SASQETDEVE ELNQLSPKRK RRRDAYMSEG CKRCNCRRSK CLKLYCECFA AGVYCVDSCA  540
CVNCYNKPEF EDTVLDIRQQ IEARNPLAFT PKVVDNAIDS SPNFTEEQDL TTPSSARHKR  600
GCNCKKSKCL KRYCECFQAK VGCSSACRCE GCKNTFGVTP EPVYNRAKKW EAHPAEKLDN  660
VKGAIACIKA PGIIHYSPTW EGISDISKLT PLSHPCSRTA FSSASSSNSA KIPQAQLPSS  720
QLQPSGAHYD IPYDDTPEIL EETSNPTKVV RASSPNQKRV SPPQSRSRLR ERSPTGLRSG  780
RKFILQAMPS FPPLTPHRNS KEGTNEIEND DK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A1e-1751264112126Protein lin-54 homolog
5fd3_B1e-1751264112126Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1497502KRKRRR
2498502RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G078800.14.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414495.10.0protein tesmin/TSO1-like CXC 3 isoform X4
TrEMBLA0A251PX430.0A0A251PX43_PRUPE; Uncharacterized protein
STRINGEMJ178940.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.16e-60TESMIN/TSO1-like CXC 2