PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G078800.12.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 862aa    MW: 94968.2 Da    PI: 7.461
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G078800.12.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR47.43.9e-15560598341
                  TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                          +k+CnC++skClk+YCeCfaag++C ++C C +C Nk e
  Prupe.3G078800.12.p 560 CKRCNCRRSKCLKLYCECFAAGVYCVDSCACVNCYNKPE 598
                          89**********************************975 PP
2TCR52.11.3e-16646684139
                  TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                          ++k+gCnCkkskClk+YCeCf+a++ Cs+ C+Ce+CkN+
  Prupe.3G078800.12.p 646 RHKRGCNCKKSKCLKRYCECFQAKVGCSSACRCEGCKNT 684
                          589***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.0E-15558599IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163435.241559686IPR005172CRC domain
PfamPF036382.6E-11561596IPR005172CRC domain
SMARTSM011141.2E-16646687IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.1E-12648684IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 862 aa     Download sequence    Send to blast
MKNTWRRERE IASTRKGRGS EVAYGAFFPL GWLFKKRGKQ PLPILRLDKM DRTPEANRIA  60
ATKSSSISSS PAVQESPFSN FLSNLSPLNT ATTASYTQTL LGTNLPTPPV VFTSPHINLQ  120
RETSFLERDD IVEAGSEVYK ECNTNIVQIQ NPSFEEVQLC SPSGCVDEYL ADPVEVDSTW  180
SADLRSQRTN EVPRLLHSGF APGEESNTEV CDIMFGSPEN EAVLLSDQAE KNLPLSSLEM  240
SQAAINQRDG KKTEELSRFI FEKVKESDVN ACLVSRAQNC GENAAKLHRA GCQYDEKNAS  300
SQSREDSNEC KQRVQKGFVK EGGQNERGIR RHLQFEAAKA YKFTILGNSE SPNSLTHDAT  360
NSRSPSILTN LKSLASSHFD NRASSSLQDV SCDTLQFPSS PYESFTSAQI GVNSTTSAPI  420
HSVIGLHLNR ISRSTSLSSD IFSSKKSIGY LSMPEQMLEH GSNNIATNSS SILTSAVSGK  480
IYVHVASGQQ ESQAVTEANS FTFHSTDTMK PPCHSMLVDQ ETAPCEVGMS ASQETDEVEE  540
LNQLSPKRKR RRDAYMSEGC KRCNCRRSKC LKLYCECFAA GVYCVDSCAC VNCYNKPEFE  600
DTVLDIRQQI EARNPLAFTP KVVDNAIDSS PNFTEEQDLT TPSSARHKRG CNCKKSKCLK  660
RYCECFQAKV GCSSACRCEG CKNTFGVTPE PVYNRAKKWE AHPAEKLDNV KGAIACIKAP  720
GIIHYSPTWE GISDISKLTP LSHPCSRTAF SSASSSNSAK IPQAQLPSSQ LQPSGAHYDI  780
PYDDTPEILE ETSNPTKVVR ASSPNQKRVS PPQSRSRLRE RSPTGLRSGR KFILQAMPSF  840
PPLTPHRNSK EGTNEIENDD K*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-1756169012126Protein lin-54 homolog
5fd3_B2e-1756169012126Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1546551KRKRRR
2547551RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G078800.12.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414495.10.0protein tesmin/TSO1-like CXC 3 isoform X4
TrEMBLA0A251PX950.0A0A251PX95_PRUPE; Uncharacterized protein
STRINGEMJ178940.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.11e-59TESMIN/TSO1-like CXC 2