PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G042000.1.p
Common NamePRUPE_ppa015833mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 586aa    MW: 64170.2 Da    PI: 6.8452
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G042000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.96.7e-15262321155
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         s+++GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  Prupe.3G042000.1.p 262 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 321
                         789******************655454478446*************************98 PP
2AP2483e-15364415155
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                         s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Prupe.3G042000.1.p 364 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 415
                         78****************988532...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.57E-16262331IPR016177DNA-binding domain
CDDcd000181.67E-21262331No hitNo description
PfamPF008472.3E-11263321IPR001471AP2/ERF domain
SMARTSM003802.1E-28263335IPR001471AP2/ERF domain
PROSITE profilePS5103218.689263329IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-15263330IPR001471AP2/ERF domain
PRINTSPR003673.6E-6264275IPR001471AP2/ERF domain
PfamPF008476.0E-10364415IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-18364425IPR016177DNA-binding domain
CDDcd000183.11E-24364425No hitNo description
PROSITE profilePS5103219.006365423IPR001471AP2/ERF domain
SMARTSM003806.7E-34365429IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-18365424IPR001471AP2/ERF domain
PRINTSPR003673.6E-6405425IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    Send to blast
MSNWLGFSLT PHLRIHEGYG GGEDQQDHGG GGGGGGGFTS QMTIMPLRSD GSLCVPPADP  60
FRRPNGSEDW RYENHMGATS VTDPNDEGGP KLEDFLGSCY SSSPPPSETK VYNCQSTQQD  120
QNPETISQIN VNEAPNFNPT TNNGEDNNNN HHLIQPYSHY CTLNPPSLIQ SNGMYKSWLG  180
QTVPFSDEKS TPCGDHHQAN GNSFHQSSLS LTMSPSLQQN GNNMGAISQL QIVESKKRPV  240
GKSAAREPVP RKSIDTFGQR TSQFRGVTRH RWTGRYEAHL WDNSCRKEGQ TRKGRQVYLG  300
GYDKEEKAAR AYDLAALKYW GSTTHINFPL STYERELEEM KNMTRQEFVA NLRRKSSGFS  360
RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGTSAVT  420
NFDMSRYDVK RICSSSTLIA SELAKRLPKD STPAAIEDFN SCGSSTSAQP LLAIASGEPC  480
DDMAEMVWNG NNAEDHSHSH HENSNTTNNA ALGASSSRNS SSPQSPKCSF GHTSEFGLGG  540
GDYSHAYFSL QGAKYEDGNG GGNDHSRLGN LGLVPQVPMF ALWND*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, seedlings, inflorescence, and siliques. Also detected at low levels in leaves. {ECO:0000269|PubMed:15988559}.
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G042000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020416416.10.0AP2-like ethylene-responsive transcription factor AIL1 isoform X2
SwissprotQ1PFE11e-137AIL1_ARATH; AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A251PUZ80.0A0A251PUZ8_PRUPE; Uncharacterized protein
STRINGEMJ173810.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102743137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-133AP2 family protein
Publications ? help Back to Top
  1. Todd J,Post-Beittenmiller D,Jaworski JG
    KCS1 encodes a fatty acid elongase 3-ketoacyl-CoA synthase affecting wax biosynthesis in Arabidopsis thaliana.
    Plant J., 1999. 17(2): p. 119-30
    [PMID:10074711]