PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G015300.1.p
Common NamePRUPE_ppa002343mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 705aa    MW: 78320.8 Da    PI: 6.4206
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G015300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.43.3e-202579256
                        T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
            Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                        +k +++t+eq+++LeelF+++ +p+ ++r++L+++lgL+ rq+k+WFqN+R++ k
  Prupe.3G015300.1.p 25 KKYHRHTSEQIQRLEELFKECAHPDDNQRQQLSRELGLEPRQIKFWFQNKRTQTK 79
                        78999**********************************************9987 PP
2START137.41.5e-432244453206
                         HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
               START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                         a +a +el+k  + +ep+W ks+      +n+d + ++f++ +       ++e +++sgvv   ++ lv ++ld++ +W   ++     a+
  Prupe.3G015300.1.p 224 AASAIEELLKSFEINEPLWIKSPgdgrYLLNRDSYDKIFPRPNHfksssARVESSKDSGVVSISAEHLVDIFLDSS-KWEDLFPtiitNAK 313
                         567899*****************998878999999999988666899999**************************.**999999999*** PP

                         EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEE CS
               START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskv 164
                         t++v++sg      g lqlm+ ++  lsplv  Rdf+f+R+++q + g+wvivdvS d +++   s+   R+ +lpSg++i+++ ng skv
  Prupe.3G015300.1.p 314 TIQVLESGmvgnqsGRLQLMYEQMHILSPLVLsRDFYFLRHCQQIEIGTWVIVDVSYDFPKET--SACQTRSWRLPSGCMIKDMHNGCSKV 402
                         *******************************99***************************996..579999999***************** PP

                         EEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
               START 165 twvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                         tw+ehv++++++  h l+r l+ s +a ga +w  tlqr ce+
  Prupe.3G015300.1.p 403 TWIEHVEVDDKTQtHRLYRDLICSNVAYGAERWIVTLQRMCER 445
                         **********9998***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.68E-191282IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.5E-211283IPR009057Homeodomain-like
PROSITE profilePS5007117.1192181IPR001356Homeobox domain
SMARTSM003895.5E-172385IPR001356Homeobox domain
PfamPF000469.0E-182579IPR001356Homeobox domain
CDDcd000862.29E-172582No hitNo description
PROSITE patternPS0002705679IPR017970Homeobox, conserved site
PROSITE profilePS5084843.52213448IPR002913START domain
SuperFamilySSF559611.92E-29214447No hitNo description
CDDcd088757.89E-107220444No hitNo description
SMARTSM002341.7E-28222445IPR002913START domain
PfamPF018527.6E-36224445IPR002913START domain
Gene3DG3DSA:3.30.530.202.3E-10272409IPR023393START-like domain
SuperFamilySSF559613.16E-16497695No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    Send to blast
MELPKGNAGV SGDEQEPSSS RRGNKKYHRH TSEQIQRLEE LFKECAHPDD NQRQQLSREL  60
GLEPRQIKFW FQNKRTQTKA QNERADNTVL RVNNERIQCE NFAFREALKN VICPTCGGPP  120
FGEEERQLCL QKLQLENAQL REEHDKVASL LSKYIGKPIS HIDSLASAAG SSFDFSSGSS  180
MNQGMGSPPL SLNPTNPAVA NNAALAYQLK EIPEMEKTHM ADTAASAIEE LLKSFEINEP  240
LWIKSPGDGR YLLNRDSYDK IFPRPNHFKS SSARVESSKD SGVVSISAEH LVDIFLDSSK  300
WEDLFPTIIT NAKTIQVLES GMVGNQSGRL QLMYEQMHIL SPLVLSRDFY FLRHCQQIEI  360
GTWVIVDVSY DFPKETSACQ TRSWRLPSGC MIKDMHNGCS KVTWIEHVEV DDKTQTHRLY  420
RDLICSNVAY GAERWIVTLQ RMCERFDYSM DEVAPGCEFG GVITTPQGRR STMKLSHRMV  480
KNFCGMLSMA GKLDFPQLSE VHNSGVRVSV RKNTEPGQPN GMVVSVATSL WLPLPSQNVF  540
NFFRDEETRL QWDVLCNGNP VHEVTRISTG THPGNCISII RPFIPTENNM VMLQESYIDS  600
LGALVIYAPV DIPALNIAVC GEDSSKIPIL PSGFVISGDG HPETGPAASN GRSGGSLLTV  660
AFQILVSSPT SSKQLNMESV ATVNTLISST VQKIKAALNC SGLD*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G015300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020415996.10.0homeobox-leucine zipper protein ROC8
SwissprotQ69T580.0ROC8_ORYSJ; Homeobox-leucine zipper protein ROC8
TrEMBLA0A251PUX60.0A0A251PUX6_PRUPE; Uncharacterized protein
STRINGEMJ161970.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF10263398
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0homeodomain GLABROUS 11