PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G289600.1.p | ||||||||
Common Name | PRUPE_ppa022719mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 24485.1 Da PI: 4.5634 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.2 | 6.4e-16 | 67 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r +++g+Wv+eIr+p++ ++r++lg++ +e+Aa+a++ a+ +l+g Prupe.2G289600.1.p 67 PVYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYAKPEMAAAAYDVAAIALKG 116 68****6..678*********843...5***********************9988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 4.8E-9 | 67 | 116 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.3E-25 | 68 | 125 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.5E-26 | 68 | 130 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.75E-17 | 68 | 125 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 19.045 | 68 | 124 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.89E-15 | 69 | 126 | No hit | No description |
PRINTS | PR00367 | 1.1E-5 | 69 | 80 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-5 | 106 | 126 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
MADPYRNVPK SDQPTPTSNS SNPAFILLPP PAPPDPTPPA AHDRDCSSSP RPGPTGASTS 60 SSPRGHPVYR GIRSRSGKWV SEIREPRKTT RIWLGTYAKP EMAAAAYDVA AIALKGPDTA 120 LNFPNLILTY PIPASSAASD IRAAAARAAQ SRAEMISAGE SGGRSEPGGV KTEEGRVGQD 180 EEEEEFMDEE ALLNMPNLLV DMAEGMLVSP PRISSEDSPG NSDGGENLWS Y* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G289600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007220719.2 | 1e-166 | ethylene-responsive transcription factor ERF027 | ||||
Swissprot | Q9FJ90 | 1e-51 | ERF25_ARATH; Ethylene-responsive transcription factor ERF025 | ||||
TrEMBL | A0A251QN30 | 1e-164 | A0A251QN30_PRUPE; Uncharacterized protein | ||||
STRING | XP_008234297.1 | 1e-161 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF562 | 32 | 144 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 4e-37 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G289600.1.p |
Entrez Gene | 18784908 |
Publications ? help Back to Top | |||
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