PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G275700.1.p | ||||||||
Common Name | PRUPE_ppa021631mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 318aa MW: 35412.8 Da PI: 4.9178 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00081 | 7 | 27 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k+F + + H+r+H Prupe.2G275700.1.p 7 CKICNKRFANGKAMGGHMRSH 27 *******************99 PP | |||||||
2 | zf-C2H2 | 13.2 | 0.00028 | 177 | 199 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H Prupe.2G275700.1.p 177 YKCETCNKAFRSYQALGGHRASH 199 9***********99999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.67E-8 | 4 | 27 | No hit | No description |
Pfam | PF13912 | 1.0E-8 | 4 | 29 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.972 | 5 | 32 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.12 | 5 | 27 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 7 | 27 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.67E-8 | 172 | 199 | No hit | No description |
Pfam | PF13912 | 4.6E-11 | 177 | 201 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 10.346 | 177 | 199 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.024 | 177 | 199 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 179 | 199 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 3.6E-7 | 245 | 268 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.681 | 246 | 268 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.61 | 246 | 268 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 248 | 268 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence Send to blast |
MEKHRICKIC NKRFANGKAM GGHMRSHLAK LPLPAKPQSP QQQQQLSNSP ESSPPLSSTN 60 RAMHSSPSLD SAIHDGDSDT ESHPRNPTRR RSKRRRKVIG KAAEAALEAE QVSSVSDAFS 120 TEDVARCLIM LSMDKWGKWE KAKLKKQVDE SVDEDEDEDE DESAFQAQTG ALTQGKYKCE 180 TCNKAFRSYQ ALGGHRASHK KIIKTQVFDV EDDDDDDFEE EEEEDDDVIG NNGNSGNLVV 240 DQQRTFECSF CFKQFDSGQA LGGHKKVHYY NNLTHNARNV SSSSTNFVDN LVIDLNLPAP 300 EEEDGELSQL EFSTVSD* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G275700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007219537.2 | 0.0 | zinc finger protein ZAT9 | ||||
TrEMBL | M5X5G8 | 0.0 | M5X5G8_PRUPE; Uncharacterized protein (Fragment) | ||||
STRING | EMJ20736 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF767 | 34 | 122 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 8e-36 | C2H2-like zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G275700.1.p |
Entrez Gene | 18786195 |