PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G256900.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 389aa    MW: 42473.1 Da    PI: 4.3774
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G256900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1879129155
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a+++a+k+++g
  Prupe.2G256900.1.p  79 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALDAALAYDEAAKAMYG 129
                         56*****999.**********8...3.35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.9E-1379129IPR001471AP2/ERF domain
CDDcd000182.93E-3079139No hitNo description
SMARTSM003805.0E-3680143IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2080137IPR016177DNA-binding domain
PROSITE profilePS5103221.41780137IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-3080138IPR001471AP2/ERF domain
PRINTSPR003672.7E-98192IPR001471AP2/ERF domain
PRINTSPR003672.7E-9103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MGAYDQGSNE VALTLDSTRK RKTRSRRDGT SVAETLEKWK EYNKQLESDN NEGKTRKVPA  60
KGSKKGCMKG KGGPDNSRCN YRGVRQRTWG KWVAEIREPN RGSRLWLGTF PTALDAALAY  120
DEAAKAMYGP AARLNLPNVA NYSSWKESSQ ETSSATTPSG SSAVATPGCS GSTSSSNHSE  180
VCADEDSKGF LDVKTENGEG ESAIHAWSNA VNQALVKEET KDEFTEGYFH NDQPAVKPEA  240
YVGDFNWAGG QYTGDYLENF TEEEVFDVDE LLSPLDDTPV RNPEPEQSLG SDVGQPGCSG  300
MHPYECDRPS NLSYQLQFPD AKLLGSLNHM EQGPSGGEYN FDFLKRDDVT GEDDQGYYNL  360
GLSDLGLGDF TGGTMQPEDG SYNFSMDM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1780137260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11722TRKRKT
22027RKTRSRRD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G256900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ7391450.0JQ739145.1 UNVERIFIED: Prunus persica dehydration responsive element binding protein DREB2A-like (DREB2A) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020413813.10.0dehydration-responsive element-binding protein 2C
TrEMBLA0A251QLK50.0A0A251QLK5_PRUPE; Uncharacterized protein
STRINGXP_008233818.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117534106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-42ERF family protein