PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G253700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 359aa MW: 40308.5 Da PI: 6.9969 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.4 | 5.9e-32 | 77 | 130 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Prupe.2G253700.1.p 77 SRLRWTPDLHLCFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 130 69***************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.847 | 73 | 133 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.6E-30 | 73 | 131 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 6.81E-15 | 74 | 131 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.4E-23 | 77 | 132 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.8E-9 | 78 | 129 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence Send to blast |
MKSKSSTEEV SETSPSISKK EFEDEDDEGD EGEEEEVDKD SLQLRNNGVS SSNSTIEENE 60 KKGVSGSVRQ YVRSKTSRLR WTPDLHLCFV HAVERLGGQE RATPKLVLQL MNVKGLSIAH 120 VKSHLQMYRS KKMEDPDQVM SEQGFFMEGG DNHIYNLTQL SMLQSFNQWP SSGLRYGTAT 180 DAAWRGRQHQ IYSPYNTHRT ALLDHNTRNI GLYGSVADRI FGNNNNPTSA NNHLHTNNPS 240 PSYVQTTWRR HQIRDESFQS TIHVPCQDHS WKAIRDRQNL LKRKAPDSDH TTCDLDLNLS 300 LKVPQKDDHE FGKGLEGCSL SLSLTSSSSS KLSTKKLEGG GHGRGEHGRM PSTLDLTL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 6e-18 | 77 | 132 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 6e-18 | 77 | 132 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 6e-18 | 77 | 132 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 6e-18 | 77 | 132 | 2 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00301 | DAP | Transfer from AT2G40260 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G253700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020413496.1 | 0.0 | uncharacterized protein LOC18786916 | ||||
TrEMBL | A0A251QPQ5 | 0.0 | A0A251QPQ5_PRUPE; Uncharacterized protein | ||||
STRING | EMJ22141 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2378 | 34 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 9e-52 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G253700.1.p |