PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G220100.1.p
Common NamePRUPE_ppa018704mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 495aa    MW: 53439.1 Da    PI: 6.6824
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G220100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.5e-17175224155
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Prupe.2G220100.1.p 175 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 224
                         78*******************......55************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.09E-15175232IPR016177DNA-binding domain
PfamPF008474.0E-9175224IPR001471AP2/ERF domain
PROSITE profilePS5103217.675176232IPR001471AP2/ERF domain
SMARTSM003802.0E-32176238IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-17176232IPR001471AP2/ERF domain
CDDcd000181.69E-23176231No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    Send to blast
MLDLNVNITL TSDASFDYEK TKDMEVEELP QGSRTQMEDS GTSNSSVVNA EEAPTPSNAG  60
EEDSTNNTTS SFVFDILKKD KDGLCNTTYY GGAKDQNPSL QFVTRSLFPV TGDGGGGNEA  120
ECGLGLSSAS STARPQWLNL SFAESGGQAQ AELRIMQQKK PQPRKSRRGP RSRSSQYRGV  180
TFYRRTGRWE SHIWDCGKQV YLGGFDTAHS AARAYDRAAI KFRGVDADIN FTLGDYEEDM  240
KQLGHLNKEE FVHVLRRQST GASRGNSKYR GVALPKCGGA GGRWEARMAQ FPEKKVFEKE  300
GIKYNTGREA AAVTNFVDPS IYEGEVVLDA SIEGSGHNLD LSLGISQPSS GQKGNGNLGD  360
FQFRYKERPM VNGSAASAAV GQTPHVLTMV AKHPALYSGM YPGFLQKYEE MDSDHNGAQA  420
VSSPRYTNLA WQVHGNSHSV SPVQVFSIAA SSGFPSSMAS TAPPAANYFP PNLQGSASAS  480
YNVGPLPFPT PSTM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G220100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220866.10.0AP2-like ethylene-responsive transcription factor TOE3
TrEMBLM5XSR50.0M5XSR5_PRUPE; Uncharacterized protein
STRINGEMJ220650.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28073476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.21e-75related to AP2.7