PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G215600.2.p
Common NamePRUPE_ppa000126mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 1721aa    MW: 187341 Da    PI: 6.5894
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G215600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.3e-10802845247
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                         ++WT+eE el+++  +  G++ +++Ia+ +  ++t  +c+++++k+
  Prupe.2G215600.2.p 802 NPWTPEEKELFIEKLTTCGKD-FRKIASFLD-HKTTADCVEFYYKH 845
                         69*****************99.*********.************97 PP
2Myb_DNA-binding262.2e-0810211061345
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
     Myb_DNA-binding    3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45  
                           WT  E   +++av  +G++ ++ I+r++  +R+  qck ++ 
  Prupe.2G215600.2.p 1021 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1061
                          6*****************99.*********.********8776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.93E-14787848IPR009057Homeodomain-like
PROSITE profilePS5129316.793799850IPR017884SANT domain
SMARTSM007171.9E-10800848IPR001005SANT/Myb domain
PfamPF002491.5E-7802845IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.0E-7803847IPR009057Homeodomain-like
PROSITE profilePS5129311.00210171068IPR017884SANT domain
SMARTSM007177.5E-610181066IPR001005SANT/Myb domain
SuperFamilySSF466892.42E-910191068IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.4E-510211062IPR009057Homeodomain-like
PfamPF002494.1E-610211061IPR001005SANT/Myb domain
CDDcd001676.18E-510221060No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1721 aa     Download sequence    Send to blast
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHQHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA  240
TPVQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR  360
NFCGSPSPMS QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGASCPRP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPAP LQIHSSGDAD VEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLLKV  540
VSSSDVMSHN DCSGDLDPIE TTKGEAKCLV PGKDEVKTDL SACGNSSMLL GSEIVAPVSG  600
GLGFCFSVVD TICNSICSSN KESANRSFEV FNKLLPREHY KVDISGVSIS SSGKNDSLIK  660
EKFAMRKRRL RFMERVLTLK YKAFQHLWKE DLRLLSIRKY RPKSHKKFEL SLRATNNGYQ  720
KHRSSIRSRF STPGNLSLVP TTEIINFTNK LLSDSQVKRY RNSLKMPALI LDKKEKMVTR  780
FISSNGLVED PCVVEKERAL MNPWTPEEKE LFIEKLTTCG KDFRKIASFL DHKTTADCVE  840
FYYKHHKSVC FEKTKKKADM TKQGKSSAKT YLISNGKKWN REMNAASLDI LGAASAIAAH  900
ADGSTRSRQA FSGRLYLGGY RNTNPSRGDD TTVERSCSFD AIGNERETVA ADVLAGICGS  960
LSSEAVSSCI TSSIDPGEGY REWKCQKVDS LARRPLTPDV MQNVDDETCS EESCGEMDPS  1020
DWTDAEKSSF IQAVSSYGKD FAMISRCVRT RSQHQCKVFF SKARKCLGLD LVHPVAGNGT  1080
SVGDDVNGGG SDTEDACVLE TGSGISSDKS GCRMNEDMPL SVINMDDESD PAETMNLQTG  1140
PLRSEEKNVM GQLDHEGGKT LKSLASDAVE TEDRPNLVLD DADCVRDAQK SRVFSADALK  1200
DDAAEEGILI AESEPVGGGI NFDPTNPGMD GEKLMGELPS DGNTDTSRCS LPGSVHDSNS  1260
SGNASALAGG GSCSGFSLNP ECLHQVSVGL NSMQKPSVIS MPHENRHAPA DSVSPDSAKI  1320
ECEKAFNQDI LSSTLDLQEG REPKSVGIDE CNKHLPGLPI YTNVESSQVL KGYPLQMPTK  1380
KDTNGDVTSG NLSEVQNFSK PDRKINGHYM TKDGFLQFGN CKPQCSEVDF PLAPRKVEQP  1440
VGPPKAHSWS SSDSDKPSRN GDVKLFGKIL SNPSSLSKSS SNIHENEEKG AHNHKLSNTS  1500
SNLKFTGHHN ADGNSSLLKF DCSSYVGIEK VPRRSYGFWE GNKVHAGYPS FSDSAILLAK  1560
YPAAFGNFPT TSSKMEQQPL QAVVKNNDRN INGVSVFPSR EISGSNGVVD YPVFSRSRDG  1620
AKVPPFTVDV KQQQRQDVFD MPRRNGFDTI SSLQQQGRGI VGMNVVGRGG ILVGGPCTGV  1680
SDPVAAIRMH YAKTEQYGGQ PGSMIREEES WRGGKGDVGR *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C5e-15766848990NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D5e-15766848990NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.131760.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G215600.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020413134.10.0uncharacterized protein LOC18786141 isoform X2
TrEMBLA0A251QJE80.0A0A251QJE8_PRUPE; Uncharacterized protein
STRINGEMJ215100.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.10.0MYB family protein