PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G215600.1.p
Common NamePRUPE_ppa000126mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 1722aa    MW: 187412 Da    PI: 6.5894
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G215600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.32.4e-10803846247
                         SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                         ++WT+eE el+++  +  G++ +++Ia+ +  ++t  +c+++++k+
  Prupe.2G215600.1.p 803 NPWTPEEKELFIEKLTTCGKD-FRKIASFLD-HKTTADCVEFYYKH 846
                         69*****************99.*********.************97 PP
2Myb_DNA-binding262.2e-0810221062345
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
     Myb_DNA-binding    3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45  
                           WT  E   +++av  +G++ ++ I+r++  +R+  qck ++ 
  Prupe.2G215600.1.p 1022 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1062
                          6*****************99.*********.********8776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.93E-14788849IPR009057Homeodomain-like
PROSITE profilePS5129316.793800851IPR017884SANT domain
SMARTSM007171.9E-10801849IPR001005SANT/Myb domain
PfamPF002491.5E-7803846IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.0E-7804848IPR009057Homeodomain-like
PROSITE profilePS5129311.00210181069IPR017884SANT domain
SMARTSM007177.5E-610191067IPR001005SANT/Myb domain
SuperFamilySSF466892.42E-910201069IPR009057Homeodomain-like
PfamPF002494.1E-610221062IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.4E-510221063IPR009057Homeodomain-like
CDDcd001676.18E-510231061No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1722 aa     Download sequence    Send to blast
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHQHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA  240
TPVQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR  360
NFCGSPSPMS QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGASCPRP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPAP LQIHSSGDAD VEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLLKV  540
VSSSDVMSHN DCSGDLDPIE TTKGEAKCLV PGKDEVKTDL SACGNSSMLL GSEIVAPVSG  600
GLGFCFSVVD TICNSICSSN KESANRSFEV FNKLLPREHY KVDISGVSIS SSGKNDSLIK  660
EKFAMRKRRL RFMERVLTLK YKAFQHLWKE DLRLLSIRKY RPKSHKKFEL SLRATNNGYQ  720
KHRSSIRSRF STPAGNLSLV PTTEIINFTN KLLSDSQVKR YRNSLKMPAL ILDKKEKMVT  780
RFISSNGLVE DPCVVEKERA LMNPWTPEEK ELFIEKLTTC GKDFRKIASF LDHKTTADCV  840
EFYYKHHKSV CFEKTKKKAD MTKQGKSSAK TYLISNGKKW NREMNAASLD ILGAASAIAA  900
HADGSTRSRQ AFSGRLYLGG YRNTNPSRGD DTTVERSCSF DAIGNERETV AADVLAGICG  960
SLSSEAVSSC ITSSIDPGEG YREWKCQKVD SLARRPLTPD VMQNVDDETC SEESCGEMDP  1020
SDWTDAEKSS FIQAVSSYGK DFAMISRCVR TRSQHQCKVF FSKARKCLGL DLVHPVAGNG  1080
TSVGDDVNGG GSDTEDACVL ETGSGISSDK SGCRMNEDMP LSVINMDDES DPAETMNLQT  1140
GPLRSEEKNV MGQLDHEGGK TLKSLASDAV ETEDRPNLVL DDADCVRDAQ KSRVFSADAL  1200
KDDAAEEGIL IAESEPVGGG INFDPTNPGM DGEKLMGELP SDGNTDTSRC SLPGSVHDSN  1260
SSGNASALAG GGSCSGFSLN PECLHQVSVG LNSMQKPSVI SMPHENRHAP ADSVSPDSAK  1320
IECEKAFNQD ILSSTLDLQE GREPKSVGID ECNKHLPGLP IYTNVESSQV LKGYPLQMPT  1380
KKDTNGDVTS GNLSEVQNFS KPDRKINGHY MTKDGFLQFG NCKPQCSEVD FPLAPRKVEQ  1440
PVGPPKAHSW SSSDSDKPSR NGDVKLFGKI LSNPSSLSKS SSNIHENEEK GAHNHKLSNT  1500
SSNLKFTGHH NADGNSSLLK FDCSSYVGIE KVPRRSYGFW EGNKVHAGYP SFSDSAILLA  1560
KYPAAFGNFP TTSSKMEQQP LQAVVKNNDR NINGVSVFPS REISGSNGVV DYPVFSRSRD  1620
GAKVPPFTVD VKQQQRQDVF DMPRRNGFDT ISSLQQQGRG IVGMNVVGRG GILVGGPCTG  1680
VSDPVAAIRM HYAKTEQYGG QPGSMIREEE SWRGGKGDVG R*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4a69_C5e-15767849990NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D5e-15767849990NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.131760.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G215600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220311.10.0uncharacterized protein LOC18786141 isoform X1
TrEMBLM5XR660.0M5XR66_PRUPE; Uncharacterized protein
STRINGEMJ215100.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49863352
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.10.0MYB family protein