PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.2G203100.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 195aa MW: 22756.9 Da PI: 8.229

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G203100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	130.9	9.3e-41	16	144	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lp+GfrF+Ptdeelv++yLk+kv+g ++++e +i+e+di+k+ePw+L k +k ++++ +fFs+ +y+++k+++r+t+ g+Wk tg++ Prupe.2G203100.1.p 16 LPVGFRFRPTDEELVDYYLKNKVQGMDFHAEGIIDEIDILKFEPWNLVaKsLMKPDDENGFFFSQP--EYTQKKNTKRSTEVGFWKITGRE 104 79**************************999**********7443555566777999886..5677889************ PP NAM 90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 +e+ ++ +++++g k++L+fy g+ +++ ktdWvmhey Prupe.2G203100.1.p 105 HEIRTRdrRRTVIGKKRILTFYIGHGRNSDKTDWVMHEYY 144 99767778*************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.62E-41	12	152	IPR003441	NAC domain
PROSITE profile	PS51005	41.31	16	161	IPR003441	NAC domain
Pfam	PF02365	1.2E-24	17	144	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence Send to blast
MISFSRAAEE EGDLSLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW 60 NLVAKSLMKP DDENGFFFSQ PEYTQKKNTK RSTEVGFWKI TGREHEIRTR DRRRTVIGKK 120 RILTFYIGHG RNSDKTDWVM HEYYIPKAHP NANQRCRLAL EVTSFDFLLP LLSLHNWFSN 180 LIICRGTSFS VTVT*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-26	14	143	15	140	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-26	14	143	15	140	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-26	14	143	15	140	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-26	14	143	15	140	NO APICAL MERISTEM PROTEIN
3swm_A	2e-26	14	143	18	143	NAC domain-containing protein 19
3swm_B	2e-26	14	143	18	143	NAC domain-containing protein 19
3swm_C	2e-26	14	143	18	143	NAC domain-containing protein 19
3swm_D	2e-26	14	143	18	143	NAC domain-containing protein 19
3swp_A	2e-26	14	143	18	143	NAC domain-containing protein 19
3swp_B	2e-26	14	143	18	143	NAC domain-containing protein 19
3swp_C	2e-26	14	143	18	143	NAC domain-containing protein 19
3swp_D	2e-26	14	143	18	143	NAC domain-containing protein 19
4dul_A	2e-26	14	143	15	140	NAC domain-containing protein 19
4dul_B	2e-26	14	143	15	140	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G203100.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007220418.2	1e-111	NAC domain-containing protein 5
TrEMBL	A0A251QIP5	1e-143	A0A251QIP5_PRUPE; Uncharacterized protein
STRING	EMJ21995	1e-112	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13478	5	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	1e-32	NAC 014

Link Out ? help Back to Top
Phytozome	Prupe.2G203100.1.p