PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G202800.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 471aa    MW: 54263.9 Da    PI: 7.8793
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G202800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM123.61.7e-38171391127
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                         lp+GfrF+Ptdeelv++yLk+k+eg + ++e++i+e+di+k+ePwdLp k  +k+++++w+fF k +k        +ratk+g+Wk t kd
  Prupe.2G202800.1.p  17 LPVGFRFRPTDEELVNYYLKNKLEGMHSHAENIIDEIDILKFEPWDLPdKsLIKSDDENWFFFYKYKK-------GSRATKEGFWKITSKD 100
                         79****************************999**************964477888899999987644.......579999********** PP

                 NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                         + ++++ +++++  k++L+fy gr ++++kt+Wv+hey 
  Prupe.2G202800.1.p 101 RVIKARdNRTVIAKKRILTFYIGRVRESTKTNWVIHEYY 139
                         ****995566688899**********************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-4415161IPR003441NAC domain
PROSITE profilePS5100546.62117162IPR003441NAC domain
PfamPF023652.1E-2218139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MARLSRAAEE EEGDLLLPVG FRFRPTDEEL VNYYLKNKLE GMHSHAENII DEIDILKFEP  60
WDLPDKSLIK SDDENWFFFY KYKKGSRATK EGFWKITSKD RVIKARDNRT VIAKKRILTF  120
YIGRVRESTK TNWVIHEYYI PDDAHPNANK QRDFVLCRLK KNVKKSDENA DVATCDEGEP  180
STHNASAFEN QPVHSMESLE EDIQQRENPD YFERTMDRWL ASSRSNNDHN ATFADNDSES  240
EFEEALRTLI PKPVHARVVG LQGRTYTSSP PMRDTEVILH NQLSRPAASP VHVAPKPQTS  300
ELQLQSGTSE GTHRPQPRSI NVLRDTSAVN VDAFNVSINC IQLATDDEYY TKERTRRRRY  360
PPVGKLREIK LQQSKAKEPE ERRTSVDLPQ KQISITKSSI DRKVAQGKNA EKDVEQTQNR  420
TTPSNWKGSF ITWQTFPLTS PPSVYICNTV LGAILFYFCV REVVLYGKWC *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-301516115164NO APICAL MERISTEM PROTEIN
1ut4_B1e-301516115164NO APICAL MERISTEM PROTEIN
1ut7_A1e-301516115164NO APICAL MERISTEM PROTEIN
1ut7_B1e-301516115164NO APICAL MERISTEM PROTEIN
4dul_A1e-301516115164NAC domain-containing protein 19
4dul_B1e-301516115164NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G202800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412085.10.0NAC domain-containing protein 62 isoform X1
TrEMBLA0A251QIP90.0A0A251QIP9_PRUPE; Uncharacterized protein
STRINGXP_008244179.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-41NAC transcription factor-like 9