PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 492aa MW: 55687 Da PI: 4.6075 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 79.2 | 9e-25 | 19 | 206 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkklelee...............................vikevdiykvePwdLpk............. 49 p frF+P+de +v + L kk++gk+ ++ +i+e+d yk+ePwdL Prupe.2G202200.1.p 19 PEFRFRPSDEKMV-NLLWKKINGKDYQVMPeinykpwdlpdnesiplflrflkqlmqgkasIIPEIDFYKHEPWDLAGnlslslftfhfli 108 679**********.99*********666435678899999999****************988**************845899********* PP NAM 50 .................kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdW 121 + + w+ Fs+ d ky + r+nr t++g+Wk tg+ +ev+s+ +++l+ kktL+f+ gr +k++ktdW Prupe.2G202200.1.p 109 sktcfvlhfagaglmfpDSPYQARTWFCFSRPDYKYVDSPRRNRLTEKGFWKITGQPREVKSRqlSKSLTCKKKTLTFHLGRPKKSSKTDW 199 999999998888776663334789**************************************97777779999****************** PP NAM 122 vmheyrl 128 v +ey l Prupe.2G202200.1.p 200 VKQEYYL 206 *****87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.726 | 17 | 229 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.3E-12 | 19 | 205 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-21 | 130 | 229 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence Send to blast |
MSSSSSTTTT EAWVLDLLPE FRFRPSDEKM VNLLWKKING KDYQVMPEIN YKPWDLPDNE 60 SIPLFLRFLK QLMQGKASII PEIDFYKHEP WDLAGNLSLS LFTFHFLISK TCFVLHFAGA 120 GLMFPDSPYQ ARTWFCFSRP DYKYVDSPRR NRLTEKGFWK ITGQPREVKS RQLSKSLTCK 180 KKTLTFHLGR PKKSSKTDWV KQEYYLTPND PGSNPNQLSG LVLYRVKYRS ADYESDNNYV 240 LGTGNLNDGE PGGFVSSDFD DMIQEPCDQQ EHLDSPSPPP EPPRPHQLPQ LGNVHGSTGD 300 YIASNSDNQA AAIHHMITDE EELLAYKELE RVLLGSGNPD DGEARTCVSS DMLRELCAQL 360 GEDLDSPFPP PGPPELGNAP DVYTDECRSW PSPIEDNDSS LPNKNNIPTN YDSKPVSNTA 420 SNFENQTKDE RIPEVYSQSE ENLQSFFRSL EVENYTLPSP ILYVEQGDVL HANNYIGCNE 480 SQYAALFPQS S* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020412379.1 | 0.0 | NAC domain-containing protein 101 | ||||
TrEMBL | A0A251QIY5 | 0.0 | A0A251QIY5_PRUPE; Uncharacterized protein | ||||
STRING | XP_008244234.1 | 0.0 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17148 | 2 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10480.3 | 1e-20 | NAC domain containing protein 50 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202200.1.p |