PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G202000.1.p | ||||||||
Common Name | PRUPE_ppa026972mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 455aa MW: 50978.3 Da PI: 4.3117 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 132.5 | 2.9e-41 | 17 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 pGfrF Pt+e lv++yLkkk+egk+ +++++i+e+d++k+eP d p+ + +e ew+fFs+ d ky++++r nrat++g+ k tg Prupe.2G202000.1.p 17 LPGFRFYPTEEVLVSYYLKKKTEGKDSDFSHIIPEIDVCKHEPCDVPAffeeaDFPDHEMEWFFFSQPDYKYTNSTRCNRATDQGFYKITG 107 69***************************999***************6455443444777******************************* PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k +e++++ +++++g k+tL+fy+gr p+++kt+W+mhey l Prupe.2G202000.1.p 108 KVREIKARrSKAVIGKKRTLTFYEGRVPNAKKTNWIMHEYYL 149 ******98566679**************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.15E-44 | 12 | 175 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 46.171 | 16 | 175 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-21 | 18 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MSSISTMEEG DSIPVVLPGF RFYPTEEVLV SYYLKKKTEG KDSDFSHIIP EIDVCKHEPC 60 DVPAFFEEAD FPDHEMEWFF FSQPDYKYTN STRCNRATDQ GFYKITGKVR EIKARRSKAV 120 IGKKRTLTFY EGRVPNAKKT NWIMHEYYLT NTELAQLGPN TNQRKDFVLC RLKNKSANYK 180 KLKDDSICNE LADTGSGGGI ASNSEDDQAA GADMISEPLE HLASQEVGDV LNDNGSGLIE 240 NNDISICDDD QIDAWIFSDF DSQAAYDLLQ EQYCAEPGEN LDSPLPPPQP TLPPLPQDYC 300 SSTQQSPLYT NQGNVPCVYD GDCNRQQSPI GDRNSYLTHK NNMSMNNQIE PVSNITYGVQ 360 NRATGESNSE VYNNSTNDFK EPVCNITYNS NNGAPDERIL EAVKFQGDGP KENLGSPFDP 420 FQLLDFTLLS PMNSELGDFE HGNKLCWHAM SCNL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-28 | 18 | 181 | 17 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G202000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020412194.1 | 0.0 | protein NTM1-like 9 isoform X1 | ||||
TrEMBL | A0A251QIL4 | 0.0 | A0A251QIL4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ21037 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13710 | 5 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 2e-42 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G202000.1.p |
Entrez Gene | 18787361 |