PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G183200.1.p
Common NamePRUPE_ppa018978mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 288aa    MW: 32269 Da    PI: 4.6869
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G183200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-1898149156
                 AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                         ++++GVr+++ +grW+AeIr p++   r+r++lg+f+taeeA  a+++a+ +++g+
  Prupe.2G183200.1.p  98 KKFRGVRQRR-WGRWAAEIRNPTS---RARVWLGTFDTAEEAGLAYDRAAIAFKGH 149
                         59*****998.**********965...4**********************999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381231.2E-391274IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000185.08E-3098155No hitNo description
Gene3DG3DSA:3.30.730.101.7E-2799156IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-2099155IPR016177DNA-binding domain
PROSITE profilePS5103221.95799156IPR001471AP2/ERF domain
SMARTSM003801.2E-3099162IPR001471AP2/ERF domain
PfamPF008478.7E-1399149IPR001471AP2/ERF domain
PRINTSPR003675.2E-10100111IPR001471AP2/ERF domain
PRINTSPR003675.2E-10122138IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MNRTKYTEHR NVTTKFVKTL TKHSPESNIV APKIVRISFT DGDATDSSGD EGEERIVVKR  60
TINEIRIEDC SAPRLFSKPK APRCRANDES NNVSPNGKKF RGVRQRRWGR WAAEIRNPTS  120
RARVWLGTFD TAEEAGLAYD RAAIAFKGHL AFTNFIKPPE IAVPATPDND CKPISWETSP  180
NAAVIGECDH SLRSPTSVLS PGEAEIEWRP VGISERDDFG AFESEFLLND CFEPEAPAPI  240
FFDEMRVVPE MLLKDEDFSD LSLDFRSCKW DDVEDYFEGA CDESGAL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-1797155362ATERF1
3gcc_A1e-1797155362ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G183200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007219312.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLM5X4V00.0M5X4V0_PRUPE; Uncharacterized protein
STRINGEMJ205110.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-42cytokinin response factor 4