PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G182800.7.p | ||||||||
Common Name | PRUPE_ppa006173mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 425aa MW: 45316.4 Da PI: 8.7945 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 72.6 | 5.5e-23 | 282 | 344 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN aLk+e+++l++++++lk e+ Prupe.2G182800.7.p 282 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDALSAENVALKSEISRLTENSSTLKLEN 344 89**********************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.2E-33 | 1 | 98 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 4.6E-25 | 129 | 261 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-18 | 276 | 341 | No hit | No description |
SMART | SM00338 | 9.0E-22 | 282 | 346 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.0E-21 | 282 | 344 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.116 | 284 | 347 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-11 | 285 | 341 | No hit | No description |
CDD | cd14702 | 2.36E-20 | 287 | 335 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 289 | 304 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence Send to blast |
MGNDDDGKSA KSEKSSSPLT ADQTNHSNQT NVHVYPDWAA MQAYYGPRVA LPPYYNSAVA 60 SGHAPHPYMW GPPQPMMPPY GTPYAAMYSH GYAHPAVPLG SHGQAVPSSP SAATPLNMET 120 PTKSSGNADR GLMKKLKRFD ALAMSIGNSN VGDAEGGAEH SVSQSLGTEG SSEGSDGNTA 180 GENQTRRKRS REGTPATAGD GKTDMQPSPV SAKEVNAASD KVLGATVAAP SVPGKLVGPV 240 VSPGMTMALE FKNSPNLNSK SSSTSVPQSC AVLPPEAWMH NERELKRERR KQSNRESARR 300 SRLRKQAETE ELARKVDALS AENVALKSEI SRLTENSSTL KLENATLMDK LKNTRVGRME 360 EIMMNIDDKR VQPFSTENLL SRVNNSGSIA RDAEKEGDMY EKNSGAKLHQ LLDASPRADA 420 VAAG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 298 | 304 | RRSRLRK |
2 | 298 | 305 | RRSRLRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.13180 | 0.0 | fruit |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00318 | DAP | Transfer from AT2G46270 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G182800.7.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT139012 | 4e-52 | BT139012.1 Medicago truncatula clone JCVI-FLMt-18F5 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007218055.1 | 0.0 | common plant regulatory factor 1 | ||||
Refseq | XP_020413223.1 | 0.0 | common plant regulatory factor 1 | ||||
Refseq | XP_020413224.1 | 0.0 | common plant regulatory factor 1 | ||||
Refseq | XP_020413225.1 | 0.0 | common plant regulatory factor 1 | ||||
Swissprot | Q99089 | 1e-149 | CPRF1_PETCR; Common plant regulatory factor 1 | ||||
TrEMBL | M5X011 | 0.0 | M5X011_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19254 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 1e-110 | G-box binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G182800.7.p |
Entrez Gene | 18784774 |
Publications ? help Back to Top | |||
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