PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G182800.4.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 326aa    MW: 35103.9 Da    PI: 7.372
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G182800.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.23.7e-23183245163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN aLk+e+++l++++++lk e+
  Prupe.2G182800.4.p 183 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDALSAENVALKSEISRLTENSSTLKLEN 245
                         89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-33198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.5E-14129199No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-17181242No hitNo description
PfamPF001702.0E-21183245IPR004827Basic-leucine zipper domain
SMARTSM003389.0E-22183247IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.116185248IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-11186242No hitNo description
CDDcd147022.93E-20188236No hitNo description
PROSITE patternPS000360190205IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MGNDDDGKSA KSEKSSSPLT ADQTNHSNQT NVHVYPDWAA MQAYYGPRVA LPPYYNSAVA  60
SGHAPHPYMW GPPQPMMPPY GTPYAAMYSH GYAHPAVPLG SHGQAVPSSP SAATPLNMET  120
PTKSSGNADR GLMKKLKRFD ALAMSIGNSN VGDAEGGAEH SVSQSLGTEG SSEGSDGNTA  180
GNERELKRER RKQSNRESAR RSRLRKQAET EELARKVDAL SAENVALKSE ISRLTENSST  240
LKLENATLMD KLKNTRVGRM EEIMMNIDDK RVQPFSTENL LSRVNNSGSI ARDAEKEGDM  300
YEKNSGAKLH QLLDASPRAD AVAAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199205RRSRLRK
2199206RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.131800.0fruit
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G182800.4.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1390123e-52BT139012.1 Medicago truncatula clone JCVI-FLMt-18F5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028056742.11e-130common plant regulatory factor 1-like isoform X2
SwissprotQ990893e-64CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A251QKZ20.0A0A251QKZ2_PRUPE; Uncharacterized protein
STRINGXP_002511955.11e-126(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.26e-95G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]