PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G158400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 92aa MW: 10100.6 Da PI: 7.5205 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.8 | 1.8e-11 | 51 | 80 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 +g WT+eEde+l++av+++ g++Wk+I + Prupe.2G158400.1.p 51 KGGWTEEEDEILAHAVQKFNGRNWKKIGVY 80 688************************866 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.2E-8 | 48 | 77 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.23E-7 | 48 | 80 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.388 | 51 | 81 | IPR017877 | Myb-like domain |
Pfam | PF00249 | 6.9E-9 | 51 | 80 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 5.65E-7 | 54 | 81 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence Send to blast |
MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG RMAGPIRRST KGGWTEEEDE 60 ILAHAVQKFN GRNWKKIGVY LHMTLFFFIS L* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G158400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT893402 | 1e-102 | KT893402.1 Prunus persica cultivar Xiaobaitao Myb family transcription factor 3R-1 (MYB3R-1) mRNA, complete cds. | |||
GenBank | KT893403 | 1e-102 | KT893403.1 Prunus persica cultivar Jinliuzaohong Myb family transcription factor 3R-1 (MYB3R-1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021817082.1 | 8e-46 | uncharacterized protein LOC110759336 | ||||
TrEMBL | A0A251QGJ8 | 3e-61 | A0A251QGJ8_PRUPE; Uncharacterized protein | ||||
STRING | EMJ20690 | 5e-46 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF37517 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.1 | 3e-16 | Homeodomain-like protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G158400.1.p |