PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G156900.2.p
Common NamePRUPE_ppa001436mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 796aa    MW: 86560 Da    PI: 6.2698
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G156900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.47.6e-21124179156
                         TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
            Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                         +++ +++t++q++eLe+lF+++++p++++r eL+++l L++rqVk+WFqNrR+++k
  Prupe.2G156900.2.p 124 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMK 179
                         688999***********************************************999 PP
2START30.57.9e-11331408169
                         HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCG CS
               START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddk 69 
                         ela++a++elvk+a+ +ep+W +s     e +n +e++++f++  +     + +ea+r++g+v+ ++  lve+l++++
  Prupe.2G156900.2.p 331 ELALAAMDELVKLAQTDEPLWLRSLeggrEVLNHEEYMRSFTPCIGlkpngFVTEASRETGMVIINSLALVETLMESM 408
                         5899************************99***********9999899999************************987 PP
3START136.13.9e-4340852194206
                         EEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS
               START  94 mvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183
                         m aelq+lsplvp R++ f+R+++q+ +g+w++vdvSvd  ++ +  + ++ +++lpSg+++++++ng+skvtwveh++++++++h+l+r+
  Prupe.2G156900.2.p 408 MHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSVDTIRDTSGAPTFMNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRP 498
                         789****************************************999********************************************* PP

                         HHHHHHHHHHHHHHHHTXXXXXX CS
               START 184 lvksglaegaktwvatlqrqcek 206
                         +++sg+ +ga++wvatlqrqce+
  Prupe.2G156900.2.p 499 MLSSGMGFGAQRWVATLQRQCEC 521
                         *********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.98E-21104181IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.5E-22108181IPR009057Homeodomain-like
PROSITE profilePS5007117.524121181IPR001356Homeobox domain
SMARTSM003895.7E-17122185IPR001356Homeobox domain
CDDcd000862.09E-18124181No hitNo description
PfamPF000462.1E-18124179IPR001356Homeobox domain
PROSITE patternPS000270156179IPR017970Homeobox, conserved site
PROSITE profilePS5084830.974322524IPR002913START domain
SuperFamilySSF559611.26E-26323521No hitNo description
CDDcd088759.08E-99326520No hitNo description
SMARTSM002341.0E-24331521IPR002913START domain
PfamPF018521.5E-37407521IPR002913START domain
SuperFamilySSF559619.42E-24542720No hitNo description
SuperFamilySSF559619.42E-24749782No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009827Biological Processplant-type cell wall modification
GO:0042335Biological Processcuticle development
GO:0043481Biological Processanthocyanin accumulation in tissues in response to UV light
GO:0048765Biological Processroot hair cell differentiation
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 796 aa     Download sequence    Send to blast
MSFGGFLDNS TGSGGGARIV ADISYNNTSS STHSNNMPSS ALAQPRLVTQ SLTKSMFNSP  60
GLSLALQTNA DGQGDVTRMA ENFETNVGRR SREEEHESRS GSDNMDGGSG DDQDAADNTN  120
PRKKKRYHRH TPQQIQELEA LFKECPHPDE KQRLELSRRL CLETRQVKFW FQNRRTQMKT  180
QLERHENSLL RQENDKLRAE NMSIRDAMRN PICSNCGGPA IIGEISLEEQ HLRIENARLK  240
DELDRVCALA GKFLGRPISS LATSMGPPLP SSTLELGVGS NGFGGLSSVA TSMPVGPDFG  300
GGIGSAMSVV PHSRPSVTGL DRSMERSMFL ELALAAMDEL VKLAQTDEPL WLRSLEGGRE  360
VLNHEEYMRS FTPCIGLKPN GFVTEASRET GMVIINSLAL VETLMESMHA ELQVLSPLVP  420
VREVNFLRFC KQHAEGVWAV VDVSVDTIRD TSGAPTFMNC RRLPSGCVVQ DMPNGYSKVT  480
WVEHAEYDES QVHQLYRPML SSGMGFGAQR WVATLQRQCE CLAILMSSSV PTRDHTAITA  540
SGRRSMLKLA QRMTDNFCAG VCASTVHKWN KLNARNVDED VRVMTRESLD DPGEPPGIVL  600
SAATSVWLPV SPQRLFDFLR DERLRSEWDI LSNGGPMQEM AHIAKGQDPG NCVSLLRARA  660
MNANQSSMLI LQETCIDSAG GLVVYAPVDI PAMHVVMNGG DSAYVALLPS GFAIVPDGPG  720
SRGPMTVKGG GHGSSNGGGG EDATHRVSGS LLTMTFQILV NSLPSAKLTV ESVETVNNLI  780
SCTVQKIKAA LHCES*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, stems, leaves and floral buds. {ECO:0000269|PubMed:10402424}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00421DAPTransfer from AT4G00730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G156900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220256.10.0homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1
SwissprotQ0WV120.0ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2
TrEMBLA0A251QJP80.0A0A251QJP8_PRUPE; Uncharacterized protein
STRINGEMJ214550.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]