PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G104700.2.p | ||||||||
Common Name | PRUPE_ppa012926mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 149aa MW: 16633.2 Da PI: 5.7751 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.1 | 2.7e-12 | 33 | 121 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsef 90 f+ vlt+ + ++ +lv+p kf ++ +s+ t+ +g+ We+ + ++s++ l +W+ F+ +n+Lk+gD +vF+ l+ s++ Prupe.2G104700.2.p 33 FDVVLTKTNIKRLYQLVVPGKFSATLP---SCSI-PTVLIFRGKNWEMIY--HGSSSHKRLD-NWRAFAVDNNLKVGDACVFEqLEC-SST 115 5667777777888999******97773...3443.34555799*******..8888877787.********************4444.555 PP ..EEEE CS B3 91 elvvkv 96 +lv++v Prupe.2G104700.2.p 116 RLVFRV 121 555544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 9.29E-17 | 29 | 122 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.0E-14 | 29 | 123 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 3.04E-18 | 31 | 125 | No hit | No description |
SMART | SM01019 | 0.0025 | 33 | 127 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 10.842 | 33 | 127 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 7.1E-10 | 33 | 120 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MKGEPRMGDL LTSNPVIELE GDEFWPLSGK PFFDVVLTKT NIKRLYQLVV PGKFSATLPS 60 CSIPTVLIFR GKNWEMIYHG SSSHKRLDNW RAFAVDNNLK VGDACVFEQL ECSSTRLVFR 120 VQILRGDISS EFLDKLGGDN VDAPIVLE* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G104700.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007218560.1 | 1e-106 | B3 domain-containing protein Os04g0386900 | ||||
Refseq | XP_020413869.1 | 1e-106 | B3 domain-containing protein Os04g0386900 | ||||
TrEMBL | M5X1G4 | 1e-105 | M5X1G4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19759 | 1e-106 | (Prunus persica) |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G104700.2.p |
Entrez Gene | 18786370 |