PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G100300.1.p | ||||||||
Common Name | PRUPE_ppa025386mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 148aa MW: 16477.8 Da PI: 4.411 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.5 | 1.2e-13 | 32 | 120 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgrsef 90 f+ vlt+ + ++lv+p kf ++ +s t+ + +g+ We+++ ++s+ l +Wk F+ +n+Lk+gD +vF+ l+ s++ Prupe.2G100300.1.p 32 FDVVLTKTSIKPMCQLVVPGKFSATLP---SCS-IPTVLTFRGKNWEMTY--HGSSNYKRLD-NWKAFAIDNNLKVGDACVFEqLEC-SST 114 6778888888999*********97773...344.4577889*********..8888776676.********************5444.555 PP ..EEEE CS B3 91 elvvkv 96 +lv++v Prupe.2G100300.1.p 115 RLVFRV 120 555443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.1E-16 | 28 | 121 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.4E-15 | 28 | 122 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.26E-18 | 30 | 124 | No hit | No description |
SMART | SM01019 | 0.0014 | 32 | 126 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 10.729 | 32 | 126 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.3E-11 | 32 | 119 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MGEPQMEDLS TSNPVIELEG DEFWPLSGKP FFDVVLTKTS IKPMCQLVVP GKFSATLPSC 60 SIPTVLTFRG KNWEMTYHGS SNYKRLDNWK AFAIDNNLKV GDACVFEQLE CSSTRLVFRV 120 QILRGDIPSE FLDKLDGDNV DAPIVLE* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G100300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007220940.2 | 1e-106 | B3 domain-containing protein Os04g0386900 | ||||
Refseq | XP_020412717.1 | 1e-106 | B3 domain-containing protein Os04g0386900 | ||||
Refseq | XP_020412718.1 | 1e-106 | B3 domain-containing protein Os04g0386900 | ||||
Refseq | XP_020412719.1 | 1e-106 | B3 domain-containing protein Os04g0386900 | ||||
Refseq | XP_020412720.1 | 1e-106 | B3 domain-containing protein Os04g0386900 | ||||
TrEMBL | A0A251QDS6 | 1e-105 | A0A251QDS6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ22139 | 1e-105 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9722 | 26 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 3e-07 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G100300.1.p |
Entrez Gene | 18785669 |