PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G097200.2.p | ||||||||
Common Name | PRUPE_ppa008351mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 352aa MW: 38882.2 Da PI: 5.9335 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25 | 3.3e-08 | 284 | 324 | 3 | 44 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44 ++h + E+ RR ++N +++ Lr+l+P+++ + +sK iL Prupe.2G097200.2.p 284 TKHFATEKHRRVQLNGKYSALRDLVPNPT-KVYTSNSKFHIL 324 78*************************82.444558888887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.991 | 281 | 334 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.66E-7 | 282 | 335 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.1E-5 | 284 | 324 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 0.00117 | 284 | 313 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.3E-5 | 284 | 325 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0048658 | Biological Process | anther wall tapetum development | ||||
GO:0052543 | Biological Process | callose deposition in cell wall | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MYEDTVGCNF DQNSMPESAE SVLNLNPLPP PPPPQVLMPS PSETHNNNNN NSFAVAENLR 60 LSMEELSYPH QQDHHAAMEI ELQNELGFNP YSTNTDQNNH SSHLVSFEQP TNWDNIHGVH 120 DQMQQQLQDG ANGPYPPTPD LLNLFSLPRC SPSSVLQNSS INFTNPNPKS SNFPNSLGFL 180 GDVHGGIDTP PGTASSVLYD PLFHLNLPPQ PPLFRELLQS LPHGYSLPGS RNGSLFSSGG 240 DDREGIGGGV YSDGINNGRQ FENGVLEFSR EMGSIGRGRD VKGTKHFATE KHRRVQLNGK 300 YSALRDLVPN PTKVYTSNSK FHILSLQKYM LLNLIKFHEK MHISCFEVLI G* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G097200.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP689408 | 0.0 | KP689408.1 Prunus pseudocerasus isolate CL2155.2 bHLH transcription factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020413510.1 | 0.0 | transcription factor bHLH10 | ||||
Refseq | XP_020413511.1 | 0.0 | transcription factor bHLH10 | ||||
TrEMBL | A0A251QDH7 | 0.0 | A0A251QDH7_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19477 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 6e-21 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G097200.2.p |
Entrez Gene | 18786584 |